contig_metadata
12 rows where analysis = "diamond", bioproject = "PRJNA851399" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26833562 | 26833562 | PRJNA851399_P_NODE_35221_length_163_cov_0.894737_g34768_i0 | PRJNA851399 | 35221 | 163 | 0.894737 | 1.45842131 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 57 | 1.18e-7 | NR | MBS0631760.1 | 2026799 | g34768 | i0 | 52.8 | 0.975460122699387 | 53 | 25 | 97.5 | 0 | 159 | 1 | 718 | 770 | MBS0631760.1 M48 family metalloprotease [Verrucomicrobiota bacterium] | diamond | 159 | 57 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27086670 | 27086670 | PRJNA851399_P_NODE_17462_length_184_cov_1.511111_g17009_i0 | PRJNA851399 | 17462 | 184 | 1.511111 | 2.78044424 | Lacunisphaera sp. | 1961806 | Bacteria | Bacteria | 117 | 5.22e-29 | NR | MDI1334970.1 | 1961806 | g17009 | i0 | 93.3 | 0.978260869565217 | 60 | 4 | 97.8 | 0 | 182 | 3 | 408 | 467 | MDI1334970.1 penicillin-binding protein 2 [Lacunisphaera sp.] | diamond | 180 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera sp. | |
| 28002762 | 28002762 | PRJNA851399_P_NODE_41365_length_161_cov_0.910714_g40912_i0 | PRJNA851399 | 41365 | 161 | 0.910714 | 1.46624954 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 42 | 0.0229 | NR | MDB6024811.1 | 2026801 | g40912 | i0 | 43.4 | 1.86335403726708 | 53 | 23 | 98.8 | 1 | 2 | 160 | 7 | 52 | MDB6024811.1 Binding-protein-dependent transport system inner rane component [Verrucomicrobiales bacterium] | diamond | 300 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 28286494 | 28286494 | PRJNA851399_P_NODE_18586_length_181_cov_1.545455_g18133_i0 | PRJNA851399 | 18586 | 181 | 1.545455 | 2.79727355 | Terrimicrobiaceae bacterium | 2832348 | Bacteria | Bacteria | 88.2 | 1.38e-19 | NR | HEY5704678.1 | 2832348 | g18133 | i0 | 86.4 | 0.729281767955801 | 44 | 6 | 72.9 | 0 | 178 | 47 | 190 | 233 | HEY5704678.1 C4-type zinc ribbon domain-containing protein [Terrimicrobiaceae bacterium] | diamond | 132 | 88.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 30276471 | 30276471 | PRJNA851399_P_NODE_10792_length_237_cov_0.744681_g10339_i0 | PRJNA851399 | 10792 | 237 | 0.744681 | 1.76489397 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 43.5 | 0.0177 | NR | PYI75966.1 | 2026799 | g10339 | i0 | 38.8 | 0.848101265822785 | 67 | 35 | 77.2 | 2 | 41 | 223 | 102 | 168 | PYI75966.1 MAG: acyl-CoA dehydrogenase [Verrucomicrobiota bacterium] | diamond | 201 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30339873 | 30339873 | PRJNA851399_P_NODE_38792_length_162_cov_0.902655_g38339_i0 | PRJNA851399 | 38792 | 162 | 0.902655 | 1.4623011 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 62 | 1.93e-9 | NR | HXM29525.1 | 2201154 | g38339 | i0 | 51.9 | 0.962962962962963 | 52 | 25 | 96.3 | 0 | 161 | 6 | 169 | 220 | HXM29525.1 Na/Pi cotransporter family protein [Chthoniobacterales bacterium] | diamond | 156 | 62 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 30466021 | 30466021 | PRJNA851399_P_NODE_30313_length_165_cov_0.879310_g29860_i0 | PRJNA851399 | 30313 | 165 | 0.87931 | 1.4508615 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 108 | 8.37e-26 | NR | WP_300199569.1 | 1965333 | g29860 | i0 | 100 | 1.96363636363636 | 54 | 0 | 98.2 | 0 | 164 | 3 | 455 | 508 | WP_300199569.1 excinuclease ABC subunit UvrA [Prosthecobacter sp.] | diamond | 324 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 31761719 | 31761719 | PRJNA851399_P_NODE_31357_length_165_cov_0.879310_g30904_i0 | PRJNA851399 | 31357 | 165 | 0.87931 | 1.4508615 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 84.3 | 1.38e-17 | NR | HEX7569162.1 | 2499141 | g30904 | i0 | 82.6 | 1.67272727272727 | 46 | 8 | 83.6 | 0 | 165 | 28 | 294 | 339 | HEX7569162.1 PIN domain-containing protein [Verrucomicrobiia bacterium] | diamond | 276 | 84.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 32014833 | 32014833 | PRJNA851399_P_NODE_18338_length_182_cov_1.360902_g17885_i0 | PRJNA851399 | 18338 | 182 | 1.360902 | 2.47684164 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 90.5 | 1.64e-19 | NR | RFC48550.1 | 2026799 | g17885 | i0 | 74.6 | 1.96153846153846 | 59 | 15 | 97.3 | 0 | 2 | 178 | 289 | 347 | RFC48550.1 MAG: MFS family permease [Verrucomicrobiota bacterium] | diamond | 357 | 90.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32181420 | 32181420 | PRJNA851399_P_NODE_30278_length_165_cov_0.879310_g29825_i0 | PRJNA851399 | 30278 | 165 | 0.87931 | 1.4508615 | Bacteria | 2 | Bacteria | Bacteria | 93.6 | 1.11e-20 | NR | MES2465762.1 | 2026799 | g29825 | i0 | 75.5 | 1.90909090909091 | 53 | 13 | 96.4 | 0 | 5 | 163 | 384 | 436 | MES2465762.1 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Verrucomicrobiota bacterium] | diamond | 315 | 93.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32204732 | 32204732 | PRJNA851399_P_NODE_19738_length_178_cov_1.581395_g19285_i0 | PRJNA851399 | 19738 | 178 | 1.581395 | 2.8148831 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 105 | 8.61e-25 | NR | MDR3455851.1 | 2499141 | g19285 | i0 | 86.4 | 1.98876404494382 | 59 | 8 | 99.4 | 0 | 177 | 1 | 222 | 280 | MDR3455851.1 WecB/TagA/CpsF family glycosyltransferase [Verrucomicrobiia bacterium] | diamond | 354 | 105 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 32867592 | 32867592 | PRJNA851399_P_NODE_10840_length_236_cov_1.080214_g10387_i0 | PRJNA851399 | 10840 | 236 | 1.080214 | 2.54930504 | Opitutaceae bacterium TAV1 | 278956 | Bacteria | Bacteria | 48.1 | 3.6e-4 | NR | EIQ00196.1 | 278956 | g10387 | i0 | 83.3 | 0.635593220338983 | 24 | 4 | 30.5 | 0 | 73 | 2 | 3 | 26 | EIQ00196.1 site-specific DNA methylase [Opitutaceae bacterium TAV1] | diamond | 150 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium TAV1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;