RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA849822" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849822 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16536092 16536092 PRJNA849822_P_NODE_16593_length_356_cov_1.653710_g16419_i0 PRJNA849822 16593 356 1.65371 5.8872076 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 227 5.679999999999999e-74   NR MBX9724270.1 2364082 g16419 i0 94.9 0.99438202247191 118 6 99.4 0 3 356 32 149 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 354 227 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
27528894 27528894 PRJNA849822_P_NODE_43523_length_241_cov_2.386905_g43349_i0 PRJNA849822 43523 241 2.386905 5.75244105 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 47 9.41e-4   NR HEY9784183.1 2364082 g43349 i0 39.5 2.80082987551867 76 44 93.4 2 240 16 51 125 HEY9784183.1 tetratricopeptide repeat protein [Candidatus Obscuribacterales bacterium] diamond 675 47 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28349812 28349812 PRJNA849822_P_NODE_42466_length_243_cov_0.917647_g42292_i0 PRJNA849822 42466 243 0.917647 2.22988221 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 162 4.45e-44   NR MBX9673982.1 2364082 g42292 i0 98.8 0.987654320987654 80 1 98.8 0 242 3 126 205 MBX9673982.1 DNA-directed RNA polymerase subunit beta [Candidatus Obscuribacterales bacterium] diamond 240 162 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28854810 28854810 PRJNA849822_P_NODE_11068_length_446_cov_1.667560_g10895_i0 PRJNA849822 11068 446 1.66756 7.4373176 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 60.1 1.58e-7   NR HEY9814218.1 2364082 g10895 i0 32.1 0.901345291479821 134 87 87.4 2 9 398 90 223 HEY9814218.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 402 60.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29297083 29297083 PRJNA849822_P_NODE_41389_length_244_cov_0.912281_g41215_i0 PRJNA849822 41389 244 0.912281 2.22596564 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 85.1 4.22e-17   NR MCA0314639.1 2052166 g41215 i0 100 0.504098360655738 41 0 50.4 0 123 1 1 41 MCA0314639.1 Fe-S cluster assembly protein SufB [Candidatus Melainabacteria bacterium] diamond 123 85.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29991790 29991790 PRJNA849822_P_NODE_18911_length_333_cov_1.065385_g18737_i0 PRJNA849822 18911 333 1.065385 3.54773205 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 62.4 7.53e-9   NR HEY9814218.1 2364082 g18737 i0 35.7 0.756756756756757 84 51 73 2 249 7 14 97 HEY9814218.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 252 62.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30600215 30600215 PRJNA849822_P_NODE_27253_length_279_cov_1.543689_g27079_i0 PRJNA849822 27253 279 1.543689 4.30689231 Bacteria 2 Bacteria Bacteria 107 2.28e-27   NR PKL76191.1 2013813 g27079 i0 77.8 5.50537634408602 63 14 67.7 0 189 1 4 66 PKL76191.1 MAG: nucleoside-diphosphate kinase [Candidatus Melainabacteria bacterium HGW-Melainabacteria-1] diamond 1536 107 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium HGW-Melainabacteria-1
30908186 30908186 PRJNA849822_P_NODE_6094_length_630_cov_3.052065_g5925_i0 PRJNA849822 6094 630 3.052065 19.2280095 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 263 1.79e-84   NR MFA6211476.1 2364082 g5925 i0 61.1 2.97619047619048 208 79 98.1 2 11 628 2 209 MFA6211476.1 alcohol dehydrogenase [Candidatus Obscuribacterales bacterium] diamond 1875 263 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31034724 31034724 PRJNA849822_P_NODE_40235_length_245_cov_0.906977_g40061_i0 PRJNA849822 40235 245 0.906977 2.22209365 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 171 4.9699999999999994e-48   NR MBN9396776.1 2052166 g40061 i0 100 0.991836734693878 81 0 99.2 0 244 2 135 215 MBN9396776.1 DNA mismatch repair endonuclease MutL [Candidatus Melainabacteria bacterium] diamond 243 171 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;