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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA849646" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 29 ✖

bioproject 1

  • PRJNA849646 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9766231 9766231 PRJNA849646_P_NODE_24308_length_260_cov_2.080214_g24190_i0 PRJNA849646 24308 260 2.080214 5.4085564 archaeon 1906665 Archaea Archaea 101 5.219999999999999e-23   NR NCQ52188.1 1906665 g24190 i0 62.8 0.992307692307692 86 31 99.2 1 260 3 102 186 NCQ52188.1 DNA repair protein RadA [archaeon] diamond 258 101 1 Archaea               archaeon
13591897 13591897 PRJNA849646_P_NODE_26051_length_257_cov_1.342391_g25933_i0 PRJNA849646 26051 257 1.342391 3.44994487 Halorussus salinisoli 2558242 Archaea Archaea 143 3.3599999999999998e-40   NR WP_137287559.1 2558242 g25933 i0 75.3 0.992217898832685 85 21 99.2 0 3 257 9 93 WP_137287559.1 arylamine N-acetyltransferase family protein [Halorussus salinisoli] diamond 255 143 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus salinisoli
14866217 14866217 PRJNA849646_P_NODE_2832_length_339_cov_1.157895_g2714_i0 PRJNA849646 2832 339 1.157895 3.92526405 archaeon 1906665 Archaea Archaea 169 3.2399999999999998e-46   NR NCQ51755.1 1906665 g2714 i0 74.8 0.982300884955752 111 28 98.2 0 337 5 640 750 NCQ51755.1 DNA mismatch repair protein MutS [archaeon] diamond 333 169 1 Archaea               archaeon
16140915 16140915 PRJNA849646_P_NODE_23333_length_262_cov_1.629630_g23215_i0 PRJNA849646 23333 262 1.62963 4.2696306 Halomicrobium zhouii 767519 Archaea Archaea 115 1.32e-27   NR WP_143117730.1 767519 g23215 i0 63.5 1.94656488549618 85 31 97.3 0 7 261 230 314 WP_143117730.1 FAD-dependent oxidoreductase [Halomicrobium zhouii] diamond 510 115 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium zhouii
19964802 19964802 PRJNA849646_P_NODE_40296_length_234_cov_2.645963_g40178_i0 PRJNA849646 40296 234 2.645963 6.19155342 root 1 Root_unresolved Root_unresolved 116 3.9199999999999995e-30   NR NCP72581.1 1906665 g40178 i0 70.1 24.6666666666667 77 23 98.7 0 3 233 74 150 NCP72581.1 UMP kinase [archaeon] diamond 5772 117 0.991452991452991 Archaea               archaeon
26833459 26833459 PRJNA849646_P_NODE_29741_length_250_cov_3.457627_g29623_i0 PRJNA849646 29741 250 3.457627 8.6440675 archaeon 1906665 Archaea Archaea 78.6 3e-15   NR NCP98219.1 1906665 g29623 i0 45.3 0.9 75 41 90 0 21 245 1 75 NCP98219.1 hypothetical protein [archaeon] diamond 225 78.6 1 Archaea               archaeon
26968207 26968207 PRJNA849646_P_NODE_19842_length_269_cov_1.183673_g19724_i0 PRJNA849646 19842 269 1.183673 3.18408037 Methanobacterium 2160 Archaea Archaea 95.1 9.94e-21   NR MEN4017723.1 2164 g19724 i0 56.3 2.86617100371747 87 30 97 1 269 9 93 171 MEN4017723.1 MnmC family methyltransferase [Methanobacterium sp.] diamond 771 95.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
27402655 27402655 PRJNA849646_P_NODE_22663_length_263_cov_2.047368_g22545_i0 PRJNA849646 22663 263 2.047368 5.38457784 archaeon 1906665 Archaea Archaea 73.6 1.17e-13   NR NCQ51857.1 1906665 g22545 i0 66.7 1.24334600760456 54 18 61.6 0 165 4 3 56 NCQ51857.1 DUF285 domain-containing protein [archaeon] diamond 327 73.6 1 Archaea               archaeon
27600496 27600496 PRJNA849646_P_NODE_8184_length_292_cov_2.018265_g8066_i0 PRJNA849646 8184 292 2.018265 5.8933338 root 1 Root_unresolved Root_unresolved 57.8 3.37e-7   NR HET8689327.1 2213 g8066 i0 44 1.73630136986301 84 44 83.2 2 2 244 359 442 HET8689327.1 hypothetical protein [Methanosarcina sp.] diamond 507 58.2 0.993127147766323 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
27655359 27655359 PRJNA849646_P_NODE_28144_length_253_cov_1.516667_g28026_i0 PRJNA849646 28144 253 1.516667 3.83716751 Methanobacteriota archaeon 2026739 Archaea Archaea 117 9.14e-29   NR MBT6072449.1 2026739 g28026 i0 66.7 0.960474308300395 81 27 96 0 4 246 334 414 MBT6072449.1 hypothetical protein [Methanobacteriota archaeon] diamond 243 117 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28191654 28191654 PRJNA849646_P_NODE_2826_length_339_cov_1.624060_g2708_i0 PRJNA849646 2826 339 1.62406 5.5055634 Halocatena salina 2934340 Archaea Archaea 56.2 1.95e-6   NR WP_247993589.1 2934340 g2708 i0 60.9 0.814159292035398 46 18 40.7 0 200 337 1 46 WP_247993589.1 GTPase HflX [Halocatena salina] diamond 276 56.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena salina
28665660 28665660 PRJNA849646_P_NODE_9427_length_289_cov_1.425926_g9309_i0 PRJNA849646 9427 289 1.425926 4.12092614 Halocatena marina 2934937 Archaea Archaea 71.2 3.9e-12   NR WP_248909452.1 2934937 g9309 i0 56.5 0.716262975778547 69 29 71.6 1 210 4 1 68 WP_248909452.1 ABC transporter permease [Halocatena marina] diamond 207 71.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena marina
28949908 28949908 PRJNA849646_P_NODE_27348_length_254_cov_2.348066_g27230_i0 PRJNA849646 27348 254 2.348066 5.96408764 Haloglomus halophilum 2962672 Archaea Archaea 105 3.8200000000000005e-27   NR WP_254822153.1 2962672 g27230 i0 83.6 0.720472440944882 61 10 72 0 71 253 14 74 WP_254822153.1 winged helix-turn-helix transcriptional regulator [Haloglomus halophilum] diamond 183 105 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus halophilum
29170832 29170832 PRJNA849646_P_NODE_24009_length_261_cov_1.340426_g23891_i0 PRJNA849646 24009 261 1.340426 3.49851186 Halocatena marina 2934937 Archaea Archaea 136 5.709999999999998e-35   NR WP_264554989.1 2934937 g23891 i0 80.2 2.96551724137931 86 17 98.9 0 261 4 94 179 WP_264554989.1 ArnT family glycosyltransferase [Halocatena marina] diamond 774 136 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena marina
29265221 29265221 PRJNA849646_P_NODE_34229_length_246_cov_0.890173_g34111_i0 PRJNA849646 34229 246 0.890173 2.18982558 uncultured archaeon A 115547 Archaea Archaea 182 6.51e-57   NR ESS04286.1 1412871 g34111 i0 98.8 1 82 1 100 0 1 246 40 121 ESS04286.1 MAG: thioredoxin [uncultured archaeon A07HR67] diamond 246 182 1 Archaea               uncultured archaeon A07HR67
29265222 29265222 PRJNA849646_P_NODE_40769_length_232_cov_2.672956_g40651_i0 PRJNA849646 40769 232 2.672956 6.20125792 Halococcus 2249 Archaea Archaea 150 2.0299999999999994e-42   NR WP_005042596.1 2249 g40651 i0 93.5 0.995689655172414 77 5 99.6 0 2 232 226 302 WP_005042596.1 MULTISPECIES: DUF2332 domain-containing protein [Halococcus] diamond 231 150 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus  
29675533 29675533 PRJNA849646_P_NODE_30650_length_249_cov_3.284091_g30532_i0 PRJNA849646 30650 249 3.284091 8.17738659 archaeon 1906665 Archaea Archaea 50.4 7.45e-6   NR NCQ51540.1 1906665 g30532 i0 38 1.93975903614458 71 43 85.5 1 7 219 1 70 NCQ51540.1 BspA family leucine-rich repeat surface protein [archaeon] diamond 483 50.4 1 Archaea               archaeon
29738759 29738759 PRJNA849646_P_NODE_37250_length_242_cov_1.822485_g37132_i0 PRJNA849646 37250 242 1.822485 4.4104137 archaeon 1906665 Archaea Archaea 82.8 2.08e-16   NR NCQ52224.1 1906665 g37132 i0 52.7 0.91735537190082606 74 33 91.7 1 20 241 5 76 NCQ52224.1 RNA ligase, T4 RnlA family [archaeon] diamond 222 82.8 1 Archaea               archaeon
29897052 29897052 PRJNA849646_P_NODE_34091_length_246_cov_0.890173_g33973_i0 PRJNA849646 34091 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 61.6 8.24e-9   NR NCQ51474.1 1906665 g33973 i0 34.1 1 82 52 97.6 1 3 242 354 435 NCQ51474.1 AAA domain-containing protein [archaeon] diamond 246 61.6 1 Archaea               archaeon
30244594 30244594 PRJNA849646_P_NODE_34632_length_245_cov_1.790698_g34514_i0 PRJNA849646 34632 245 1.790698 4.3872101 Nitrososphaera sp. 1971748 Archaea Archaea 164 1.68e-45   NR HKX81644.1 1971748 g34514 i0 100 0.991836734693878 81 0 99.2 0 244 2 81 161 HKX81644.1 hypothetical protein [Nitrososphaera sp.] diamond 243 164 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
30623428 30623428 PRJNA849646_P_NODE_13973_length_280_cov_1.487923_g13855_i0 PRJNA849646 13973 280 1.487923 4.1661844 Natrinema halophilum 1699371 Archaea Archaea 144 4.6099999999999997e-38   NR WP_179262033.1 1699371 g13855 i0 78.4 0.942857142857143 88 19 94.3 0 266 3 241 328 WP_179262033.1 hypothetical protein [Natrinema halophilum] diamond 264 144 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema halophilum
30939734 30939734 PRJNA849646_P_NODE_25414_length_258_cov_1.664865_g25296_i0 PRJNA849646 25414 258 1.664865 4.2953517 archaeon 1906665 Archaea Archaea 131 2.75e-34   NR NCQ52134.1 1906665 g25296 i0 72.6 0.976744186046512 84 23 97.7 0 257 6 191 274 NCQ52134.1 AAA domain-containing protein [archaeon] diamond 252 131 1 Archaea               archaeon
30939745 30939745 PRJNA849646_P_NODE_6314_length_310_cov_2.527426_g6196_i0 PRJNA849646 6314 310 2.527426 7.8350206 Halomarina oriensis 671145 Archaea Archaea 67.4 2.75e-12   NR WP_158204443.1 671145 g6196 i0 76.9 0.37741935483871 39 9 37.7 0 194 310 1 39 WP_158204443.1 helix-turn-helix domain-containing protein [Halomarina oriensis] diamond 117 67.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina oriensis
31066190 31066190 PRJNA849646_P_NODE_26855_length_255_cov_2.241758_g26737_i0 PRJNA849646 26855 255 2.241758 5.7164829 Halobacteriales archaeon QH_6_64_2 1904752 Archaea Archaea 50.8 9.45e-6   NR PSP44550.1 1919154 g26737 i0 65.7 0.411764705882353 35 12 41.2 0 105 1 3 37 PSP44550.1 MAG: hypothetical protein BRC68_02340 [Halobacteriales archaeon QH_6_64_20] diamond 105 50.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QH_6_64_20
31066196 31066196 PRJNA849646_P_NODE_42575_length_219_cov_4.136986_g42457_i0 PRJNA849646 42575 219 4.136986 9.05999934 Halocatena marina 2934937 Archaea Archaea 55.8 3.73e-7   NR WP_264555414.1 2934937 g42457 i0 56 0.684931506849315 50 20 65.8 1 22 165 170 219 WP_264555414.1 DUF7344 domain-containing protein [Halocatena marina] diamond 150 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena marina
31382217 31382217 PRJNA849646_P_NODE_8036_length_292_cov_3.278539_g7918_i0 PRJNA849646 8036 292 3.278539 9.57333388 archaeon 1906665 Archaea Archaea 65.1 1.19e-10   NR NCQ51858.1 1906665 g7918 i0 60.4 0.986301369863014 48 19 49.3 0 3 146 5 52 NCQ51858.1 BspA family leucine-rich repeat surface protein [archaeon] diamond 288 65.1 1 Archaea               archaeon
31666674 31666674 PRJNA849646_P_NODE_36657_length_243_cov_0.905882_g36539_i0 PRJNA849646 36657 243 0.905882 2.20129326 Haloarculaceae archaeon 2497615 Archaea Archaea 101 1.5e-23   NR MFB6309245.1 2497615 g36539 i0 65.7 1.72839506172839 70 24 86.4 0 3 212 283 352 MFB6309245.1 hypothetical protein [Haloarculaceae archaeon] diamond 420 101 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
32363042 32363042 PRJNA849646_P_NODE_33899_length_246_cov_1.427746_g33781_i0 PRJNA849646 33899 246 1.427746 3.51225516 Nitrososphaera sp. 1971748 Archaea Archaea 44.7 0.0082   NR WP_331001769.1 1971748 g33781 i0 80.8 0.317073170731707 26 5 31.7 0 169 246 1 26 WP_331001769.1 ATP-binding protein [Nitrososphaera sp.] diamond 78 44.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32426138 32426138 PRJNA849646_P_NODE_36619_length_243_cov_0.905882_g36501_i0 PRJNA849646 36619 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 44.7 0.00785   NR NCP98117.1 1906665 g36501 i0 30.5 1.61728395061728 82 47 92.6 3 241 17 1097 1175 NCP98117.1 DNA polymerase III subunit alpha [archaeon] diamond 393 44.7 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;