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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA849646" and tax_phylum = "Deferribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Deferribacterota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849646 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3388739 3388739 PRJNA849646_P_NODE_10583_length_286_cov_4.018779_g10465_i0 PRJNA849646 10583 286 4.018779 11.49370794 Calditerrivibrio sp. 2792612 Bacteria Bacteria 181 6.64e-53   NR MCX8084312.1 2792612 g10465 i0 96.8 1.99300699300699 95 3 99.7 0 2 286 102 196 MCX8084312.1 UDP-glucose/GDP-mannose dehydrogenase family protein [Calditerrivibrio sp.] diamond 570 181 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio sp.
7216149 7216149 PRJNA849646_P_NODE_11686_length_284_cov_2.464455_g11568_i0 PRJNA849646 11686 284 2.464455 6.9990522 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 58.5 1.65e-7   NR PMP71354.1 477976 g11568 i0 53.8 0.549295774647887 52 24 54.9 0 158 3 1 52 PMP71354.1 MAG: hypothetical protein C0187_04295 [Calditerrivibrio nitroreducens] diamond 156 58.5 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
26737936 26737936 PRJNA849646_P_NODE_21221_length_266_cov_1.595855_g21103_i0 PRJNA849646 21221 266 1.595855 4.2449743 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 151 1.0599999999999999e-42   NR WP_041724295.1 477976 g21103 i0 84.1 0.992481203007519 88 14 99.2 0 264 1 154 241 WP_041724295.1 beta-ketoacyl-ACP synthase 3 [Calditerrivibrio nitroreducens] diamond 264 151 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
26928349 26928349 PRJNA849646_P_NODE_8062_length_292_cov_2.954338_g7944_i0 PRJNA849646 8062 292 2.954338 8.62666696 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 71.6 1.22e-13   NR WP_013452160.1 477976 g7944 i0 84.1 0.452054794520548 44 7 45.2 0 3 134 37 80 WP_013452160.1 hypothetical protein [Calditerrivibrio nitroreducens] diamond 132 71.6 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
27086583 27086583 PRJNA849646_P_NODE_11802_length_284_cov_1.919431_g11684_i0 PRJNA849646 11802 284 1.919431 5.45118404 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 142 1.56e-39   NR WP_013450723.1 477976 g11684 i0 71.1 1.90140845070423 90 26 95.1 0 274 5 1 90 WP_013450723.1 MBL fold metallo-hydrolase [Calditerrivibrio nitroreducens] diamond 540 142 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
27687081 27687081 PRJNA849646_P_NODE_5024_length_310_cov_3.219409_g4906_i0 PRJNA849646 5024 310 3.219409 9.9801679 Calditerrivibrio sp. 2792612 Bacteria Bacteria 62.4 4.55e-9   NR MCA1926956.1 2792612 g4906 i0 50.9 0.532258064516129 55 27 53.2 0 168 4 26 80 MCA1926956.1 precorrin-6A reductase [Calditerrivibrio sp.] diamond 165 62.4 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio sp.
27844411 27844411 PRJNA849646_P_NODE_39964_length_235_cov_3.425926_g39846_i0 PRJNA849646 39964 235 3.425926 8.0509261 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 145 3.89e-39   NR WP_013450900.1 477976 g39846 i0 87.2 0.995744680851064 78 10 99.6 0 2 235 127 204 WP_013450900.1 phosphate acyltransferase [Calditerrivibrio nitroreducens] diamond 234 145 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
28191650 28191650 PRJNA849646_P_NODE_24626_length_259_cov_4.048387_g24508_i0 PRJNA849646 24626 259 4.048387 10.48532233 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 117 3.31e-28   NR WP_171789024.1 477976 g24508 i0 67.5 1.85328185328185 80 26 92.7 0 242 3 619 698 WP_171789024.1 HD domain-containing phosphohydrolase [Calditerrivibrio nitroreducens] diamond 480 117 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
28254954 28254954 PRJNA849646_P_NODE_7966_length_293_cov_1.936364_g7848_i0 PRJNA849646 7966 293 1.936364 5.67354652 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 99.4 4.39e-22   NR WP_013451025.1 477976 g7848 i0 92.3 1.06484641638225 52 4 53.2 0 293 138 90 141 WP_013451025.1 dihydroorotase [Calditerrivibrio nitroreducens] diamond 312 99.4 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
28294866 28294866 PRJNA849646_P_NODE_4926_length_310_cov_3.291139_g4808_i0 PRJNA849646 4926 310 3.291139 10.2025309 Calditerrivibrio 545865 Bacteria Bacteria 129 2.67e-33   NR WP_013450333.1 477976 g4808 i0 63.9 2.05161290322581 108 30 98.7 2 308 3 29 133 WP_013450333.1 HD-GYP domain-containing protein [Calditerrivibrio nitroreducens] diamond 636 129 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
28697269 28697269 PRJNA849646_P_NODE_41327_length_229_cov_4.871795_g41209_i0 PRJNA849646 41327 229 4.871795 11.15641055 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 139 4.59e-37   NR WP_013451338.1 477976 g41209 i0 90.8 0.995633187772926 76 7 99.6 0 2 229 369 444 WP_013451338.1 TrkH family potassium uptake protein [Calditerrivibrio nitroreducens] diamond 228 139 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
28854794 28854794 PRJNA849646_P_NODE_19888_length_268_cov_3.846154_g19770_i0 PRJNA849646 19888 268 3.846154 10.30769272 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 161 6.01e-48   NR WP_013451946.1 477976 g19770 i0 93.2 0.985074626865672 88 6 98.5 0 266 3 23 110 WP_013451946.1 GntR family transcriptional regulator [Calditerrivibrio nitroreducens] diamond 264 161 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
29107662 29107662 PRJNA849646_P_NODE_11688_length_284_cov_2.450237_g11570_i0 PRJNA849646 11688 284 2.450237 6.95867308 Calditerrivibrio sp. 2792612 Bacteria Bacteria 142 8.299999999999998e-41   NR MCX8084670.1 2792612 g11570 i0 90.9 1.63732394366197 77 7 81.3 0 51 281 1 77 MCX8084670.1 peptide deformylase [Calditerrivibrio sp.] diamond 465 142 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio sp.
29486196 29486196 PRJNA849646_P_NODE_17410_length_273_cov_2.210000_g17292_i0 PRJNA849646 17410 273 2.21 6.0333 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 131 3.1899999999999996e-35   NR WP_013451193.1 477976 g17292 i0 67 1 91 30 100 0 273 1 73 163 WP_013451193.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Calditerrivibrio nitroreducens] diamond 273 131 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
29486200 29486200 PRJNA849646_P_NODE_28090_length_253_cov_1.711111_g27972_i0 PRJNA849646 28090 253 1.711111 4.32911083 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 157 7.62e-46   NR WP_013451142.1 477976 g27972 i0 92.9 0.99604743083004 84 6 99.6 0 1 252 85 168 WP_013451142.1 slipin family protein [Calditerrivibrio nitroreducens] diamond 252 157 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
29612388 29612388 PRJNA849646_P_NODE_29730_length_250_cov_3.677966_g29612_i0 PRJNA849646 29730 250 3.677966 9.194915 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 155 4.11e-44   NR WP_013451120.1 477976 g29612 i0 96.1 0.924 77 3 92.4 0 250 20 265 341 WP_013451120.1 aspartate-semialdehyde dehydrogenase [Calditerrivibrio nitroreducens] diamond 231 155 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
29770463 29770463 PRJNA849646_P_NODE_15091_length_278_cov_1.351220_g14973_i0 PRJNA849646 15091 278 1.35122 3.7563916 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 160 3.459999999999999e-43   NR WP_013450561.1 477976 g14973 i0 90.2 0.992805755395683 92 9 99.3 0 277 2 782 873 WP_013450561.1 SpoIIE family protein phosphatase [Calditerrivibrio nitroreducens] diamond 276 160 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
30718307 30718307 PRJNA849646_P_NODE_11534_length_285_cov_1.193396_g11416_i0 PRJNA849646 11534 285 1.193396 3.4011786 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 187 6.809999999999999e-55   NR WP_013451248.1 477976 g11416 i0 95.8 1 95 4 100 0 1 285 73 167 WP_013451248.1 L-aspartate oxidase [Calditerrivibrio nitroreducens] diamond 285 187 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
31160336 31160336 PRJNA849646_P_NODE_10035_length_288_cov_1.232558_g9917_i0 PRJNA849646 10035 288 1.232558 3.54976704 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 179 3.639999999999999e-55   NR WP_013450324.1 477976 g9917 i0 84.4 1 96 15 100 0 1 288 28 123 WP_013450324.1 isochorismatase family protein [Calditerrivibrio nitroreducens] diamond 288 179 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
31390548 31390548 PRJNA849646_P_NODE_30796_length_249_cov_2.267045_g30678_i0 PRJNA849646 30796 249 2.267045 5.64494205 Calditerrivibrio 545865 Bacteria Bacteria 89 1.91e-18   NR WP_013450164.1 477976 g30678 i0 97.6 2.02409638554217 42 1 50.6 0 1 126 433 474 WP_013450164.1 aldehyde dehydrogenase family protein [Calditerrivibrio nitroreducens] diamond 504 89 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
31508783 31508783 PRJNA849646_P_NODE_15716_length_276_cov_2.788177_g15598_i0 PRJNA849646 15716 276 2.788177 7.69536852 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 167 1.6399999999999998e-47   NR WP_013451075.1 477976 g15598 i0 90.1 0.989130434782609 91 9 98.9 0 274 2 298 388 WP_013451075.1 DegQ family serine endoprotease [Calditerrivibrio nitroreducens] diamond 273 167 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
32046453 32046453 PRJNA849646_P_NODE_26618_length_256_cov_1.306011_g26500_i0 PRJNA849646 26618 256 1.306011 3.34338816 Calditerrivibrio sp. 2792612 Bacteria Bacteria 140 6.95e-39   NR MCX8083301.1 2792612 g26500 i0 81 1.96875 84 16 98.4 0 3 254 26 109 MCX8083301.1 ParB/RepB/Spo0J family partition protein [Calditerrivibrio sp.] diamond 504 140 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio sp.
32615683 32615683 PRJNA849646_P_NODE_30480_length_250_cov_0.870056_g30362_i0 PRJNA849646 30480 250 0.870056 2.17514 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 137 7.07e-39   NR WP_013450181.1 477976 g30362 i0 82.3 0.948 79 14 94.8 0 250 14 113 191 WP_013450181.1 DedA family protein [Calditerrivibrio nitroreducens] diamond 237 137 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens
32773002 32773002 PRJNA849646_P_NODE_10140_length_287_cov_2.850467_g10022_i0 PRJNA849646 10140 287 2.850467 8.18084029 Calditerrivibrio nitroreducens 477976 Bacteria Bacteria 165 8.77e-47   NR WP_013451819.1 477976 g10022 i0 89.5 1.98606271777003 95 10 99.3 0 1 285 65 159 WP_013451819.1 sigma-54-dependent transcriptional regulator [Calditerrivibrio nitroreducens] diamond 570 165 1 Bacteria   Pseudomonadati Deferribacterota Deferribacteres Deferribacterales Calditerrivibrionaceae Calditerrivibrio Calditerrivibrio nitroreducens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;