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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA849646" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 22 ✖

bioproject 1

  • PRJNA849646 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
838041 838041 PRJNA849646_P_NODE_13821_length_280_cov_1.913043_g13703_i0 PRJNA849646 13821 280 1.913043 5.3565204 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 146 4.32e-41   NR OQR97335.1 1202772 g13703 i0 75 6.83571428571429 92 23 98.6 0 3 278 128 219 OQR97335.1 60S ribosomal protein L5 [Achlya hypogyna] diamond 1914 146 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
4666530 4666530 PRJNA849646_P_NODE_15564_length_277_cov_1.323529_g15446_i0 PRJNA849646 15564 277 1.323529 3.66617533 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 171 2.53e-51   NR XP_067817684.1 4779 g15446 i0 85.9 7.97111913357401 92 13 99.6 0 276 1 147 238 XP_067817684.1 hypothetical protein CCR75_004102 [Bremia lactucae] diamond 2208 172 0.994186046511628 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
14866076 14866076 PRJNA849646_P_NODE_17552_length_273_cov_1.540000_g17434_i0 PRJNA849646 17552 273 1.54 4.2042 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 121 2.6799999999999996e-31   NR XP_024586207.1 4781 g17434 i0 85.5 9.32967032967033 69 10 75.8 0 208 2 4 72 XP_024586207.1 40s ribosomal protein s16 [Plasmopara halstedii] diamond 2547 122 0.991803278688525 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
14866287 14866287 PRJNA849646_P_NODE_33772_length_246_cov_1.780347_g33654_i0 PRJNA849646 33772 246 1.780347 4.37965362 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 153 2.470000000000001e-44   NR XP_024577919.1 4781 g33654 i0 84.1 10 82 13 100 0 246 1 138 219 XP_024577919.1 proteasome subunit alpha type [Plasmopara halstedii] diamond 2460 153 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
14866460 14866460 PRJNA849646_P_NODE_7972_length_293_cov_1.400000_g7854_i0 PRJNA849646 7972 293 1.4 4.102 Blastocystis hominis 12968 SAR_Eukaryotes SAR_Eukaryotes 105 6.0699999999999986e-24   NR XP_012896670.1 12968 g7854 i0 55.1 5.01706484641638 98 43 99.3 1 2 292 648 745 XP_012896670.1 uncharacterized protein [Blastocystis hominis] diamond 1470 105 1 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
16535980 16535980 PRJNA849646_P_NODE_35113_length_245_cov_0.895349_g34995_i0 PRJNA849646 35113 245 0.895349 2.19360505 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 142 1.4e-37   NR XP_024578065.1 4781 g34995 i0 88.9 22.8122448979592 81 9 99.2 0 1 243 440 520 XP_024578065.1 heat shock protein 90 [Plasmopara halstedii] diamond 5589 143 0.993006993006993 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
18689393 18689393 PRJNA849646_P_NODE_16595_length_275_cov_1.524752_g16477_i0 PRJNA849646 16595 275 1.524752 4.193068 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 128 1.29e-36   NR ETM46751.1 4792 g16477 i0 84 4.90909090909091 75 12 81.8 0 273 49 10 84 ETM46751.1 elongation factor 1-alpha, partial [Phytophthora nicotianae] diamond 1350 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
22515055 22515055 PRJNA849646_P_NODE_32818_length_247_cov_1.770115_g32700_i0 PRJNA849646 32818 247 1.770115 4.37218405 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 129 2.46e-35   NR KAK1942099.1 4793 g32700 i0 80 6.75303643724696 80 15 97.2 1 8 247 48 126 KAK1942099.1 40S ribosomal protein S5-2 [Phytophthora citrophthora] diamond 1668 129 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
22910855 22910855 PRJNA849646_P_NODE_20138_length_268_cov_1.579487_g20020_i0 PRJNA849646 20138 268 1.579487 4.23302516 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 131 2.51e-33   NR KAG5179870.1 303371 g20020 i0 73 9.94029850746269 89 24 99.6 0 268 2 489 577 KAG5179870.1 succinate dehydrogenase flavoprotein subunit [Tribonema minus] diamond 2664 132 0.992424242424242 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
26737935 26737935 PRJNA849646_P_NODE_19541_length_269_cov_2.163265_g19423_i0 PRJNA849646 19541 269 2.163265 5.81918285 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 48.5 4.74e-4   NR XP_011129914.1 110365 g19423 i0 39 0.91449814126394 82 45 91.4 2 248 3 390 466 XP_011129914.1 putative pentatricopeptide repeat protein [Gregarina niphandrodes] diamond 246 48.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
26865331 26865331 PRJNA849646_P_NODE_18221_length_272_cov_1.381910_g18103_i0 PRJNA849646 18221 272 1.38191 3.7587952 Peronospora effusa 542832 SAR_Eukaryotes SAR_Eukaryotes 126 1.05e-35   NR RQM08885.1 542832 g18103 i0 92.9 2.30514705882353 70 5 77.2 0 254 45 16 85 RQM08885.1 hypothetical protein DD237_000613 [Peronospora effusa] diamond 627 126 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
27276247 27276247 PRJNA849646_P_NODE_15463_length_277_cov_1.509804_g15345_i0 PRJNA849646 15463 277 1.509804 4.18215708 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 101 1.39e-22   NR XP_011132332.1 110365 g15345 i0 80.6 0.671480144404332 62 12 67.1 0 190 5 482 543 XP_011132332.1 major facilitator superfamily transporter [Gregarina niphandrodes] diamond 186 101 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
27781561 27781561 PRJNA849646_P_NODE_42124_length_226_cov_2.732026_g42006_i0 PRJNA849646 42124 226 2.732026 6.17437876 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 138 1.95e-36   NR ETL93890.1 4792 g42006 i0 82.7 5.97345132743363 75 13 99.6 0 226 2 440 514 ETL93890.1 6-phosphogluconate dehydrogenase (decarboxylating), partial [Phytophthora nicotianae] diamond 1350 138 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
28002652 28002652 PRJNA849646_P_NODE_25445_length_258_cov_1.664865_g25327_i0 PRJNA849646 25445 258 1.664865 4.2953517 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 68.6 3.67e-11   NR TMW63146.1 41045 g25327 i0 38 0.918604651162791 79 48 90.7 1 22 255 386 464 TMW63146.1 hypothetical protein Poli38472_002087 [Pythium oligandrum] diamond 237 68.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28191652 28191652 PRJNA849646_P_NODE_27326_length_254_cov_2.425414_g27208_i0 PRJNA849646 27326 254 2.425414 6.16055156 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 143 1.59e-37   NR KAJ1439145.1 483371 g27208 i0 83.3 0.992125984251969 84 14 99.2 0 2 253 634 717 KAJ1439145.1 dynein heavy chain and region D6 of dynein motor-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 252 143 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
28728703 28728703 PRJNA849646_P_NODE_5327_length_310_cov_3.021097_g5209_i0 PRJNA849646 5327 310 3.021097 9.3654007 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 110 1.81e-25   NR KAG7373470.1 303405 g5209 i0 92.2 0.619354838709677 64 5 61.9 0 308 117 897 960 KAG7373470.1 mechanosensitive ion channel [Nitzschia inconspicua] diamond 192 110 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
30402904 30402904 PRJNA849646_P_NODE_33593_length_246_cov_2.352601_g33475_i0 PRJNA849646 33593 246 2.352601 5.78739846 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 64.3 9.84e-10   NR XP_011130027.1 110365 g33475 i0 73.8 0.51219512195122 42 11 51.2 0 245 120 2877 2918 XP_011130027.1 hypothetical protein GNI_063170 [Gregarina niphandrodes] diamond 126 64.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
30600198 30600198 PRJNA849646_P_NODE_22733_length_263_cov_1.621053_g22615_i0 PRJNA849646 22733 263 1.621053 4.26336939 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 121 8.500000000000001e-30   NR CAJ1941453.1 2856 g22615 i0 71.3 15.8783269961977 87 25 99.2 0 263 3 256 342 CAJ1941453.1 unnamed protein product [Cylindrotheca closterium] diamond 4176 122 0.991803278688525 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
31350572 31350572 PRJNA849646_P_NODE_18576_length_271_cov_1.555556_g18458_i0 PRJNA849646 18576 271 1.555556 4.21555676 Nannochloropsis gaditana 72520 SAR_Eukaryotes SAR_Eukaryotes 66.2 2.7e-10   NR EWM25424.1 72520 g18458 i0 40 1.61623616236162 90 41 85.2 2 270 40 332 421 EWM25424.1 ring zinc finger-containing protein [Nannochloropsis gaditana] diamond 438 66.2 1 Eukaryota Sar     Eustigmatophyceae Eustigmatales Monodopsidaceae Nannochloropsis Nannochloropsis gaditana
31793046 31793046 PRJNA849646_P_NODE_38137_length_241_cov_1.833333_g38019_i0 PRJNA849646 38137 241 1.833333 4.41833253 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 58.2 1.29e-7   NR KAJ1438177.1 483371 g38019 i0 86.7 0.809128630705394 30 4 37.3 0 150 239 458 487 KAJ1438177.1 Tub family-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 195 58.2 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
31864631 31864631 PRJNA849646_P_NODE_29977_length_250_cov_1.740113_g29859_i0 PRJNA849646 29977 250 1.740113 4.3502825 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 68.9 2.44e-11   NR SPQ94571.1 37360 g29859 i0 50.7 1.68 69 34 82.8 0 43 249 180 248 SPQ94571.1 unnamed protein product [Plasmodiophora brassicae] diamond 420 68.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32363044 32363044 PRJNA849646_P_NODE_35459_length_244_cov_1.801170_g35341_i0 PRJNA849646 35459 244 1.80117 4.3948548 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 47.8 5.88e-4   NR TYZ66219.1 1485010 g35341 i0 47.8 0.565573770491803 46 22 54.1 1 134 3 254 299 TYZ66219.1 hypothetical protein PybrP1_005628 [[Pythium] brassicae (nom. inval.)] diamond 138 47.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;