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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA849646" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 23 ✖

bioproject 1

  • PRJNA849646 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8490985 8490985 PRJNA849646_P_NODE_21507_length_265_cov_2.796875_g21389_i0 PRJNA849646 21507 265 2.796875 7.41171875 Tanacetum cinerariifolium 118510 Plants Plants 135 4.19e-38   NR GEY04738.1 118510 g21389 i0 80.7 8.90943396226415 88 17 99.6 0 264 1 33 120 GEY04738.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] diamond 2361 135 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
11041946 11041946 PRJNA849646_P_NODE_32569_length_247_cov_2.649425_g32451_i0 PRJNA849646 32569 247 2.649425 6.54407975 Humulus lupulus 3486 Plants Plants 86.3 1.92e-17   NR XP_062118184.1 3486 g32451 i0 57.6 1.03238866396761 85 31 99.6 2 2 247 504 586 XP_062118184.1 putative disease resistance RPP13-like protein 1 [Humulus lupulus] diamond 255 86.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Humulus Humulus lupulus
19084950 19084950 PRJNA849646_P_NODE_5435_length_310_cov_2.966245_g5317_i0 PRJNA849646 5435 310 2.966245 9.1953595 Diphasiastrum complanatum 34168 Plants Plants 139 1.03e-35   NR KAJ7519640.1 34168 g5317 i0 67.3 1.06451612903226 110 25 95.8 2 14 310 52 161 KAJ7519640.1 hypothetical protein O6H91_20G048000 [Diphasiastrum complanatum] diamond 330 139 1 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Lycopodiales Lycopodiaceae Diphasiastrum Diphasiastrum complanatum
23790397 23790397 PRJNA849646_P_NODE_18979_length_270_cov_2.172589_g18861_i0 PRJNA849646 18979 270 2.172589 5.8659903 Quillaja saponaria 32244 Plants Plants 86.3 2.57e-17   NR KAJ7950679.1 32244 g18861 i0 63.2 3.82222222222222 57 21 63.3 0 6 176 870 926 KAJ7950679.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Quillaja saponaria] diamond 1032 86.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Quillajaceae Quillaja Quillaja saponaria
26928345 26928345 PRJNA849646_P_NODE_29802_length_250_cov_2.920904_g29684_i0 PRJNA849646 29802 250 2.920904 7.30226 Gossypium barbadense 3634 Plants Plants 50.1 4.55e-5   NR PPS17938.1 3634 g29684 i0 57.1 0.42 35 15 42 0 24 128 136 170 PPS17938.1 hypothetical protein GOBAR_AA02643 [Gossypium barbadense] diamond 105 50.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium barbadense
27434354 27434354 PRJNA849646_P_NODE_24583_length_260_cov_1.256684_g24465_i0 PRJNA849646 24583 260 1.256684 3.2673784 Acer saccharum 4024 Plants Plants 43.5 0.0249   NR KAK0570868.1 4024 g24465 i0 56 0.288461538461538 25 11 28.8 0 31 105 212 236 KAK0570868.1 hypothetical protein LWI29_007685 [Acer saccharum] diamond 75 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Sapindaceae Acer Acer saccharum
27528826 27528826 PRJNA849646_P_NODE_35663_length_244_cov_1.532164_g35545_i0 PRJNA849646 35663 244 1.532164 3.73848016 Carya illinoinensis 32201 Plants Plants 120 1.08e-29   NR XP_042944684.1 32201 g35545 i0 64.6 3.88524590163934 79 28 97.1 0 8 244 552 630 XP_042944684.1 uncharacterized protein LOC122278571 [Carya illinoinensis] diamond 948 120 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Juglandaceae Carya Carya illinoinensis
27655357 27655357 PRJNA849646_P_NODE_24024_length_261_cov_1.292553_g23906_i0 PRJNA849646 24024 261 1.292553 3.37356333 Panicum miliaceum 4540 Plants Plants 76.3 5.16e-14   NR RLM49020.1 4540 g23906 i0 48.1 0.885057471264368 77 39 88.5 1 234 4 18 93 RLM49020.1 hypothetical protein C2845_PMPSC055709 [Panicum miliaceum] diamond 231 76.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Panicum Panicum miliaceum
27876107 27876107 PRJNA849646_P_NODE_3685_length_311_cov_3.117647_g3567_i0 PRJNA849646 3685 311 3.117647 9.69588217 Aegilops tauschii subsp. strangulata 200361 Plants Plants 63.9 2.34e-9   NR XP_040245475.1 200361 g3567 i0 46.8 1.05144694533762 109 50 98.4 2 6 311 74 181 XP_040245475.1 uncharacterized protein CG45076-like [Aegilops tauschii subsp. strangulata] diamond 327 63.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
27970848 27970848 PRJNA849646_P_NODE_28045_length_253_cov_1.711111_g27927_i0 PRJNA849646 28045 253 1.711111 4.32911083 Macadamia integrifolia 60698 Plants Plants 80.1 3.39e-16   NR XP_042486607.1 60698 g27927 i0 66.1 0.735177865612648 62 21 73.5 0 37 222 28 89 XP_042486607.1 uncharacterized protein LOC122066849 [Macadamia integrifolia] diamond 186 80.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
28168662 28168662 PRJNA849646_P_NODE_3645_length_311_cov_3.903361_g3527_i0 PRJNA849646 3645 311 3.903361 12.13945271 Magnoliopsida 3398 Plants Plants 49.7 3.08e-4   NR WZY99706.1 3708 g3527 i0 44.7 1.38906752411576 85 39 76.2 2 60 296 825 907 WZY99706.1 hypothetical protein YC2023_072035 [Brassica napus] diamond 432 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
28539472 28539472 PRJNA849646_P_NODE_32287_length_248_cov_0.880000_g32169_i0 PRJNA849646 32287 248 0.88 2.1824 Sphagnum balticum 128184 Plants Plants 75.1 1.62e-13   NR CAM5998736.1 128184 g32169 i0 50.7 1.69354838709677 67 32 79.8 1 28 225 153 219 CAM5998736.1 unnamed protein product [Sphagnum balticum] diamond 420 75.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
28728702 28728702 PRJNA849646_P_NODE_38927_length_240_cov_2.508982_g38809_i0 PRJNA849646 38927 240 2.508982 6.0215568 Heracleum sosnowskyi 360622 Plants Plants 108 9.62e-26   NR KAK1394734.1 360622 g38809 i0 80.3 9.525 76 14 95 1 12 239 299 373 KAK1394734.1 hypothetical protein POM88_013790 [Heracleum sosnowskyi] diamond 2286 108 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
29233935 29233935 PRJNA849646_P_NODE_15329_length_277_cov_2.122549_g15211_i0 PRJNA849646 15329 277 2.122549 5.87946073 Aegilops tauschii subsp. strangulata 200361 Plants Plants 110 6.610000000000001e-26   NR XP_020177078.1 200361 g15211 i0 77.3 2.85920577617329 66 15 71.5 0 199 2 134 199 XP_020177078.1 uncharacterized protein LOC109762617 [Aegilops tauschii subsp. strangulata] diamond 792 110 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
29612391 29612391 PRJNA849646_P_NODE_42670_length_217_cov_4.472222_g42552_i0 PRJNA849646 42670 217 4.472222 9.70472174 Aegilops tauschii subsp. strangulata 200361 Plants Plants 58.5 7.06e-8   NR XP_040251614.1 200361 g42552 i0 70.9 0.76036866359447 55 16 76 0 214 50 81 135 XP_040251614.1 putative uncharacterized protein ENSP00000383309 [Aegilops tauschii subsp. strangulata] diamond 165 58.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
29683847 29683847 PRJNA849646_P_NODE_20570_length_267_cov_2.206186_g20452_i0 PRJNA849646 20570 267 2.206186 5.89051662 Eukaryota 2759 Plants Plants 138 2.64e-38   NR KAF3671423.1 4072 g20452 i0 79.5 43.5056179775281 88 18 98.9 0 264 1 127 214 KAF3671423.1 60S ribosomal protein L26 [Capsicum annuum] diamond 11616 138 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
29897054 29897054 PRJNA849646_P_NODE_43231_length_205_cov_4.098485_g43113_i0 PRJNA849646 43231 205 4.098485 8.40189425 Nicotiana sylvestris 4096 Plants Plants 120 8.49e-33   NR XP_070020334.1 4096 g43113 i0 90.9 3.8780487804878 66 6 96.6 0 200 3 39 104 XP_070020334.1 uncharacterized protein [Nicotiana sylvestris] diamond 795 120 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
31066189 31066189 PRJNA849646_P_NODE_22095_length_264_cov_2.225131_g21977_i0 PRJNA849646 22095 264 2.225131 5.87434584 Trifolium repens 3899 Plants Plants 51.6 3.69e-5   NR KAK2371173.1 3899 g21977 i0 54.2 3.67045454545455 48 21 53.4 1 182 42 401 448 KAK2371173.1 hypothetical protein QL285_084151 [Trifolium repens] diamond 969 51.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium repens
31318769 31318769 PRJNA849646_P_NODE_15735_length_276_cov_2.581281_g15617_i0 PRJNA849646 15735 276 2.581281 7.12433556 Lolium multiflorum 4521 Plants Plants 149 8.509999999999999e-40   NR KAK1599878.1 4521 g15617 i0 78 9.89130434782609 91 20 98.9 0 275 3 396 486 KAK1599878.1 hypothetical protein QYE76_018480 [Lolium multiflorum] diamond 2730 149 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
31888086 31888086 PRJNA849646_P_NODE_4657_length_310_cov_3.506329_g4539_i0 PRJNA849646 4657 310 3.506329 10.8696199 Triticum dicoccoides 85692 Plants Plants 102 9.01e-23   NR XP_037450704.1 85692 g4539 i0 60.6 1.00645161290323 104 28 98.7 3 308 3 122 214 XP_037450704.1 signal recognition particle receptor subunit alpha-like [Triticum dicoccoides] diamond 312 102 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum dicoccoides
31888087 31888087 PRJNA849646_P_NODE_5097_length_310_cov_3.164557_g4979_i0 PRJNA849646 5097 310 3.164557 9.8101267 Aegilops tauschii subsp. strangulata 200361 Plants Plants 90.9 6.52e-19   NR XP_020178799.2 200361 g4979 i0 45 4.95483870967742 129 43 97.7 1 6 308 234 362 XP_020178799.2 uncharacterized protein LOC109764369 [Aegilops tauschii subsp. strangulata] diamond 1536 90.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
32331527 32331527 PRJNA849646_P_NODE_11239_length_285_cov_2.141509_g11121_i0 PRJNA849646 11239 285 2.141509 6.10330065 Sesamum indicum 4182 Plants Plants 43.9 0.0232   NR XP_011076532.1 4182 g11121 i0 35.1 0.778947368421053 74 47 77.9 1 59 280 53 125 XP_011076532.1 protein NRT1/ PTR FAMILY 5.5-like [Sesamum indicum] diamond 222 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
32741779 32741779 PRJNA849646_P_NODE_26800_length_255_cov_2.434066_g26682_i0 PRJNA849646 26800 255 2.434066 6.2068683 Picea sitchensis 3332 Plants Plants 95.5 2.919999999999999e-23   NR ABR17957.1 3332 g26682 i0 65.6 1.50588235294118 61 21 71.8 0 64 246 3 63 ABR17957.1 unknown [Picea sitchensis] diamond 384 95.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea sitchensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;