RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA849172" and tax_kingdom = "Methanobacteriati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 24 ✖

bioproject 1

  • PRJNA849172 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15260887 15260887 PRJNA849172_P_NODE_73892_length_265_cov_5.291667_g73532_i0 PRJNA849172 73892 265 5.291667 14.02291755 Candidatus Poseidonia alphae 1915863 Archaea Archaea 66.6 1.81e-10   NR MDA7463480.1 1915863 g73532 i0 59.3 1.87924528301887 54 22 61.1 0 3 164 264 317 MDA7463480.1 AAA family ATPase [Candidatus Poseidonia alphae] diamond 498 66.6 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Poseidoniaceae Candidatus Poseidonia Candidatus Poseidonia alphae
18688431 18688431 PRJNA849172_P_NODE_70955_length_268_cov_5.497436_g70595_i0 PRJNA849172 70955 268 5.497436 14.73312848 root 1 Root_unresolved Root_unresolved 66.2 2.74e-10   NR WP_052279112.1 2214 g70595 i0 47.7 2.95522388059702 88 44 98.5 1 268 5 239 324 WP_052279112.1 PAS domain S-box protein [Methanosarcina acetivorans] diamond 792 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina acetivorans
19961813 19961813 PRJNA849172_P_NODE_146076_length_201_cov_4.500000_g145716_i0 PRJNA849172 146076 201 4.5 9.045 Halococcus sediminicola 1264579 Archaea Archaea 115 5.430000000000001e-29   NR WP_154019981.1 1264579 g145716 i0 90.2 0.91044776119403 61 6 91 0 200 18 111 171 WP_154019981.1 IS630 family transposase [Halococcus sediminicola] diamond 183 115 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sediminicola
22512570 22512570 PRJNA849172_P_NODE_24458_length_415_cov_23.581871_g24099_i0 PRJNA849172 24458 415 23.581871 97.86476465 Archaea 2157 Archaea Archaea 82.4 3.32e-15   NR OGS43500.1 1797977 g24099 i0 39.4 2.66746987951807 127 69 86.7 3 411 52 464 589 OGS43500.1 MAG: hypothetical protein A3K76_00015 [Euryarchaeota archaeon RBG_13_57_23] diamond 1107 83.2 0.990384615384615 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_13_57_23
26865261 26865261 PRJNA849172_P_NODE_149301_length_197_cov_12.169355_g148941_i0 PRJNA849172 149301 197 12.169355 23.97362935 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 47 6.59e-4   NR MFL2951121.1 2670411 g148941 i0 43.1 1.52284263959391 51 27 76.1 2 8 157 569 618 MFL2951121.1 S8 family serine peptidase [Candidatus Thalassarchaeaceae archaeon] diamond 300 47 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
26896873 26896873 PRJNA849172_P_NODE_87581_length_253_cov_2.216667_g87221_i0 PRJNA849172 87581 253 2.216667 5.60816751 Thermoplasmata archaeon M8B2D 1933278 Archaea Archaea 62.4 4.87e-9   NR PNX50664.1 1933278 g87221 i0 42.2 0.758893280632411 64 37 75.9 0 45 236 521 584 PNX50664.1 MAG: hypothetical protein BV456_05935 [Thermoplasmata archaeon M8B2D] diamond 192 62.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon M8B2D
26905090 26905090 PRJNA849172_P_NODE_82941_length_257_cov_2.255435_g82581_i0 PRJNA849172 82941 257 2.255435 5.79646795 root 1 Root_unresolved Root_unresolved 66.6 1.71e-10   NR MCX8207589.1 90426 g82581 i0 36.5 5.96498054474708 85 54 99.2 0 257 3 293 377 MCX8207589.1 PAS domain S-box protein [Methanothrix sp.] diamond 1533 66.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
27023242 27023242 PRJNA849172_P_NODE_89562_length_252_cov_1.083799_g89202_i0 PRJNA849172 89562 252 1.083799 2.73117348 Halococcus salifodinae 36738 Archaea Archaea 51.6 3.25e-5   NR WP_241430264.1 36738 g89202 i0 60 0.833333333333333 35 14 41.7 0 252 148 954 988 WP_241430264.1 VWA domain-containing protein [Halococcus salifodinae] diamond 210 51.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus salifodinae
27781522 27781522 PRJNA849172_P_NODE_59264_length_282_cov_1.712919_g58904_i0 PRJNA849172 59264 282 1.712919 4.83043158 Halococcus thailandensis 335952 Archaea Archaea 161 5.15e-44   NR WP_241431201.1 335952 g58904 i0 86.5 1.8936170212766 89 12 94.7 0 269 3 34 122 WP_241431201.1 carboxypeptidase-like regulatory domain-containing protein [Halococcus thailandensis] diamond 534 161 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus thailandensis
27947631 27947631 PRJNA849172_P_NODE_114505_length_236_cov_6.453988_g114145_i0 PRJNA849172 114505 236 6.453988 15.23141168 Halococcus 2249 Archaea Archaea 54.7 6.69e-7   NR PSQ64376.1 1919209 g114145 i0 73.2 4.71610169491525 41 11 52.1 0 8 130 129 169 PSQ64376.1 MAG: TspO protein [Halobacteriales archaeon SW_9_67_24] diamond 1113 55.1 0.992740471869329 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon SW_9_67_24
28547751 28547751 PRJNA849172_P_NODE_69827_length_270_cov_1.467005_g69467_i0 PRJNA849172 69827 270 1.467005 3.9609135 Methanomada group 2283794 Archaea Archaea 52.8 3.63e-6   NR MEN6292523.1 2164 g69467 i0 37.1 1.33333333333333 62 39 68.9 0 83 268 1 62 MEN6292523.1 hypothetical protein [Methanobacterium sp.] diamond 360 53.1 0.994350282485876 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
29233894 29233894 PRJNA849172_P_NODE_34889_length_348_cov_3.323636_g34530_i0 PRJNA849172 34889 348 3.323636 11.56625328 Methanobacteriota archaeon 2026739 Archaea Archaea 94 1.3e-19   NR MAD73129.1 2026739 g34530 i0 90.4 0.448275862068966 52 5 44.8 0 158 3 396 447 MAD73129.1 hypothetical protein [Methanobacteriota archaeon] diamond 156 94 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29360103 29360103 PRJNA849172_P_NODE_100049_length_246_cov_1.907514_g99689_i0 PRJNA849172 100049 246 1.907514 4.69248444 Thermoplasmatota archaeon 2806419 Archaea Archaea 47 0.00125   NR HVL86810.1 2806419 g99689 i0 47.4 1.45121951219512 57 29 69.5 1 16 186 374 429 HVL86810.1 helix-turn-helix domain-containing protein [Thermoplasmatota archaeon] diamond 357 47 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29589093 29589093 PRJNA849172_P_NODE_101370_length_245_cov_3.953488_g101010_i0 PRJNA849172 101370 245 3.953488 9.6860456 root 1 Root_unresolved Root_unresolved 56.6 5.04e-7   NR WP_292345499.1 1811680 g101010 i0 70 3.64897959183673 50 14 61.2 1 231 82 215 263 WP_292345499.1 PKD domain-containing protein [Methanoregula sp. PtaB.Bin085] diamond 894 56.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp. PtaB.Bin085
30497302 30497302 PRJNA849172_P_NODE_55553_length_287_cov_1.448598_g55193_i0 PRJNA849172 55553 287 1.448598 4.15747626 Methanosarcina sp. 2213 Archaea Archaea 141 1.96e-40   NR HET8689243.1 2213 g55193 i0 71.3 0.982578397212544 94 27 98.3 0 287 6 68 161 HET8689243.1 hypothetical protein [Methanosarcina sp.] diamond 282 141 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30623370 30623370 PRJNA849172_P_NODE_31173_length_367_cov_5.061224_g30814_i0 PRJNA849172 31173 367 5.061224 18.57469208 Thermoplasmata archaeon 1906666 Archaea Archaea 66.6 1.19e-10   NR MCI4354872.1 1906666 g30814 i0 60.7 1.00544959128065 61 23 49 1 367 188 130 190 MCI4354872.1 oxidoreductase [Thermoplasmata archaeon] diamond 369 66.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30663480 30663480 PRJNA849172_P_NODE_93333_length_250_cov_0.875706_g92973_i0 PRJNA849172 93333 250 0.875706 2.189265 root 1 Root_unresolved Root_unresolved 117 6.28e-30   NR MBR3140321.1 66852 g92973 i0 67.5 15.936 83 27 99.6 0 2 250 155 237 MBR3140321.1 glucose-1-phosphate thymidylyltransferase RfbA [Methanobrevibacter sp.] diamond 3984 118 0.991525423728814 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31137131 31137131 PRJNA849172_P_NODE_94155_length_249_cov_2.789773_g93795_i0 PRJNA849172 94155 249 2.789773 6.94653477 root 1 Root_unresolved Root_unresolved 53.5 6.3e-6   NR UCF08000.1 1906666 g93795 i0 53.8 3.20481927710843 52 21 59 1 188 42 431 482 UCF08000.1 MAG: thrombospondin type 3 repeat-containing protein, partial [Thermoplasmata archaeon] diamond 798 53.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31382145 31382145 PRJNA849172_P_NODE_148716_length_198_cov_5.688000_g148356_i0 PRJNA849172 148716 198 5.688 11.26224 Thermoplasmatota archaeon 2806419 Archaea Archaea 82.8 1.21e-16   NR HUR61904.1 2806419 g148356 i0 80.4 2.09090909090909 46 9 69.7 0 138 1 9 54 HUR61904.1 ADP-forming succinate--CoA ligase subunit beta [Thermoplasmatota archaeon] diamond 414 82.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
31517087 31517087 PRJNA849172_P_NODE_82996_length_257_cov_2.108696_g82636_i0 PRJNA849172 82996 257 2.108696 5.41934872 Halococcus 2249 Archaea Archaea 120 2.78e-29   NR WP_256686162.1 224402 g82636 i0 69.4 1.98443579766537 85 26 99.2 0 256 2 653 737 WP_256686162.1 ABC transporter permease [Halococcus qingdaonensis] diamond 510 120 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus qingdaonensis
32077888 32077888 PRJNA849172_P_NODE_101838_length_245_cov_2.575581_g101478_i0 PRJNA849172 101838 245 2.575581 6.31017345 Methanosarcina sp. 2213 Archaea Archaea 73.6 3.28e-14   NR HET8688272.1 2213 g101478 i0 64 0.612244897959184 50 18 61.2 0 95 244 3 52 HET8688272.1 protein-tyrosine phosphatase family protein [Methanosarcina sp.] diamond 150 73.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32141314 32141314 PRJNA849172_P_NODE_30098_length_374_cov_2.956811_g29739_i0 PRJNA849172 30098 374 2.956811 11.05847314 Methanobacteriota archaeon 2026739 Archaea Archaea 125 1.45e-30   NR MAD73129.1 2026739 g29739 i0 79.2 0.770053475935829 96 15 77 3 374 87 448 538 MAD73129.1 hypothetical protein [Methanobacteriota archaeon] diamond 288 125 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32521195 32521195 PRJNA849172_P_NODE_122099_length_230_cov_3.343949_g121739_i0 PRJNA849172 122099 230 3.343949 7.6910827 Thermococcus sp. LS2 1638260 Archaea Archaea 46.6 3.04e-4   NR WP_167916020.1 1638260 g121739 i0 70.4 1.40869565217391 27 8 35.2 0 145 225 4 30 WP_167916020.1 IS607 family transposase, partial [Thermococcus sp. LS2] diamond 324 46.6 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. LS2
32772977 32772977 PRJNA849172_P_NODE_62540_length_278_cov_1.795122_g62180_i0 PRJNA849172 62540 278 1.795122 4.99043916 Halococcus sp. PRR34 3020830 Archaea Archaea 141 2.17e-39   NR WP_273838618.1 3020830 g62180 i0 94.6 0.798561151079137 74 4 79.9 0 55 276 7 80 WP_273838618.1 hypothetical protein [Halococcus sp. PRR34] diamond 222 141 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp. PRR34

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;