contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA849172" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22909762 | 22909762 | PRJNA849172_P_NODE_143558_length_203_cov_8.807692_g143198_i0 | PRJNA849172 | 143558 | 203 | 8.807692 | 17.87961476 | Fusobacterium | 848 | Bacteria | Bacteria | 130 | 1.74e-36 | NR | WP_177160130.1 | 848 | g143198 | i0 | 100 | 0.990147783251232 | 67 | 0 | 99 | 0 | 1 | 201 | 63 | 129 | WP_177160130.1 MULTISPECIES: ATP synthase F1 subunit delta [Fusobacterium] | diamond | 201 | 130 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | |||
| 28128851 | 28128851 | PRJNA849172_P_NODE_64505_length_275_cov_10.594059_g64145_i0 | PRJNA849172 | 64505 | 275 | 10.594059 | 29.13366225 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 95.5 | 1.56e-20 | NR | WP_304079843.1 | 157687 | g64145 | i0 | 52.8 | 0.970909090909091 | 89 | 41 | 97.1 | 1 | 270 | 4 | 117 | 204 | WP_304079843.1 hypothetical protein [Leptotrichia wadei] | diamond | 267 | 95.5 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 28444540 | 28444540 | PRJNA849172_P_NODE_107906_length_242_cov_2.378698_g107546_i0 | PRJNA849172 | 107906 | 242 | 2.378698 | 5.75644916 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 134 | 7.22e-38 | NR | WP_374124611.1 | 554406 | g107546 | i0 | 85 | 0.991735537190083 | 80 | 12 | 99.2 | 0 | 241 | 2 | 13 | 92 | WP_374124611.1 hypothetical protein [Leptotrichia hongkongensis] | diamond | 240 | 134 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 28791632 | 28791632 | PRJNA849172_P_NODE_90467_length_251_cov_3.185393_g90107_i0 | PRJNA849172 | 90467 | 251 | 3.185393 | 7.99533643 | Fusobacteriaceae bacterium | 2053555 | Bacteria | Bacteria | 67 | 1.18e-11 | NR | MBN1467264.1 | 2053555 | g90107 | i0 | 42.4 | 1.01593625498008 | 85 | 47 | 99.2 | 2 | 2 | 250 | 20 | 104 | MBN1467264.1 hypothetical protein [Fusobacteriaceae bacterium] | diamond | 255 | 67 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacteriaceae bacterium | |||
| 28917887 | 28917887 | PRJNA849172_P_NODE_87088_length_253_cov_4.200000_g86728_i0 | PRJNA849172 | 87088 | 253 | 4.2 | 10.626 | Leptotrichia sp. oral taxon 879 | 1227267 | Bacteria | Bacteria | 127 | 5.17e-32 | NR | WP_021744733.1 | 1227267 | g86728 | i0 | 97.1 | 0.8300395256917 | 70 | 2 | 83 | 0 | 1 | 210 | 720 | 789 | WP_021744733.1 PP2C family protein-serine/threonine phosphatase [Leptotrichia sp. oral taxon 879] | diamond | 210 | 127 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 879 | ||
| 29549381 | 29549381 | PRJNA849172_P_NODE_99070_length_246_cov_9.658960_g98710_i0 | PRJNA849172 | 99070 | 246 | 9.65896 | 23.7610416 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 139 | 3.28e-38 | NR | MDO4639691.1 | 554406 | g98710 | i0 | 98.6 | 0.865853658536585 | 71 | 1 | 86.6 | 0 | 34 | 246 | 1 | 71 | MDO4639691.1 capsular polysaccharide synthesis protein [Leptotrichia hongkongensis] | diamond | 213 | 139 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 29747040 | 29747040 | PRJNA849172_P_NODE_81510_length_258_cov_3.194595_g81150_i0 | PRJNA849172 | 81510 | 258 | 3.194595 | 8.2420551 | Fusobacteriales | 203491 | Bacteria | Bacteria | 53.1 | 5.31e-6 | NR | WP_231284688.1 | 157688 | g81150 | i0 | 41.9 | 3.48837209302326 | 74 | 40 | 86 | 2 | 1 | 222 | 106 | 176 | WP_231284688.1 outer membrane beta-barrel protein [Leptotrichia hofstadii] | diamond | 900 | 53.5 | 0.992523364485981 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 31255525 | 31255525 | PRJNA849172_P_NODE_43155_length_315_cov_22.214876_g42795_i0 | PRJNA849172 | 43155 | 315 | 22.214876 | 69.9768594 | Fusobacterium perfoetens | 852 | Bacteria | Bacteria | 119 | 1.59e-28 | NR | WP_235246984.1 | 852 | g42795 | i0 | 98.5 | 0.628571428571429 | 66 | 1 | 62.9 | 0 | 198 | 1 | 1 | 66 | WP_235246984.1 efflux RND transporter permease subunit [Fusobacterium perfoetens] | diamond | 198 | 119 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens | ||
| 32086310 | 32086310 | PRJNA849172_P_NODE_59818_length_281_cov_2.798077_g59458_i0 | PRJNA849172 | 59818 | 281 | 2.798077 | 7.86259637 | Leptotrichia | 32067 | Bacteria | Bacteria | 79.7 | 6.1e-15 | NR | WP_232056220.1 | 109328 | g59458 | i0 | 47.5 | 3.11743772241993 | 99 | 38 | 95 | 3 | 267 | 1 | 3192 | 3286 | WP_232056220.1 hemagglutination protein [Leptotrichia trevisanii] | diamond | 876 | 80.1 | 0.995006242197254 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia trevisanii | ||
| 32615623 | 32615623 | PRJNA849172_P_NODE_23240_length_426_cov_26.875354_g22881_i0 | PRJNA849172 | 23240 | 426 | 26.875354 | 114.48900804 | Fusobacterium | 848 | Bacteria | Bacteria | 108 | 5.96e-26 | NR | WP_177161792.1 | 848 | g22881 | i0 | 100 | 0.380281690140845 | 54 | 0 | 38 | 0 | 426 | 265 | 182 | 235 | WP_177161792.1 MULTISPECIES: 50S ribosomal protein L1 [Fusobacterium] | diamond | 162 | 108 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | |||
| 32781212 | 32781212 | PRJNA849172_P_NODE_47660_length_303_cov_2.486957_g47300_i0 | PRJNA849172 | 47660 | 303 | 2.486957 | 7.53547971 | Bacteria | 2 | Bacteria | Bacteria | 63.2 | 1.6e-9 | NR | WP_300449449.1 | 68766 | g47300 | i0 | 62.5 | 0.98019801980198 | 48 | 17 | 47.5 | 1 | 155 | 298 | 1 | 47 | WP_300449449.1 DNA adenine methylase [Fusobacterium sp.] | diamond | 297 | 63.2 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;