RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA846486" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA846486 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28034062 28034062 PRJNA846486_P_NODE_89525_length_163_cov_3.210526_g89429_i0 PRJNA846486 89525 163 3.210526 5.23315738 Minisyncoccota bacterium 2053589 Bacteria Bacteria 88.2 5.86e-19   NR HEY4480273.1 2053589 g89429 i0 73.1 1.93251533742331 52 14 95.7 0 158 3 283 334 HEY4480273.1 TIGR00730 family Rossman fold protein [Candidatus Paceibacterota bacterium] diamond 315 88.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28318055 28318055 PRJNA846486_P_NODE_76426_length_169_cov_0.866667_g76330_i0 PRJNA846486 76426 169 0.866667 1.46466723 Minisyncoccota bacterium 2053589 Bacteria Bacteria 106 1.17e-27   NR HQV64933.1 2053589 g76330 i0 91.1 0.994082840236686 56 5 99.4 0 1 168 67 122 HQV64933.1 site-specific integrase [Candidatus Paceibacterota bacterium] diamond 168 106 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28917755 28917755 PRJNA846486_P_NODE_68028_length_176_cov_1.637795_g67932_i0 PRJNA846486 68028 176 1.637795 2.8825192 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.9 1.74e-6   NR MFO0743516.1 2053589 g67932 i0 80 1.02272727272727 30 6 51.1 0 90 1 2318 2347 MFO0743516.1 fibronectin type III domain-containing protein [Candidatus Paceibacterota bacterium] diamond 180 53.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31982887 31982887 PRJNA846486_P_NODE_79538_length_168_cov_0.873950_g79442_i0 PRJNA846486 79538 168 0.87395 1.468236 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.5 1.27e-9   NR MEX0595307.1 2053589 g79442 i0 47.3 0.982142857142857 55 29 98.2 0 3 167 8 62 MEX0595307.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 58.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32867362 32867362 PRJNA846486_P_NODE_87420_length_164_cov_1.669565_g87324_i0 PRJNA846486 87420 164 1.669565 2.7380866 Minisyncoccota bacterium 2053589 Bacteria Bacteria 59.7 8.16e-9   NR HEY6019494.1 2053589 g87324 i0 46 0.914634146341463 50 27 91.5 0 155 6 74 123 HEY6019494.1 endonuclease VII domain-containing protein [Candidatus Paceibacterota bacterium] diamond 150 59.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;