RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA846486" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA846486 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26706315 26706315 PRJNA846486_P_NODE_72161_length_172_cov_1.691057_g72065_i0 PRJNA846486 72161 172 1.691057 2.90861804 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 87 3.39e-18   NR KAJ9443017.1 91374 g72065 i0 67.9 1.95348837209302 56 18 97.7 0 170 3 163 218 KAJ9443017.1 hypothetical protein DIPPA_33430 [Diplonema papillatum] diamond 336 87 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
27560116 27560116 PRJNA846486_P_NODE_35824_length_225_cov_1.363636_g35728_i0 PRJNA846486 35824 225 1.363636 3.068181 Trypanosoma rangeli SC58 429131 Euglenozoa other_Eukaryota 42 0.0413   NR ESL05026.1 429131 g35728 i0 52.8 0.48 36 13 42.7 1 42 137 43 78 ESL05026.1 hypothetical protein TRSC58_07379 [Trypanosoma rangeli SC58] diamond 108 42 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
31674906 31674906 PRJNA846486_P_NODE_81897_length_167_cov_0.881356_g81801_i0 PRJNA846486 81897 167 0.881356 1.47186452 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 3.43e-5   NR KAJ9467005.1 91374 g81801 i0 48 2.76646706586826 50 19 88 2 167 21 76 119 KAJ9467005.1 Pectin acetylesterase 3 [Diplonema papillatum] diamond 462 50.4 0.994047619047619 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;