RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA846486" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA846486 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28318053 28318053 PRJNA846486_P_NODE_3506_length_624_cov_9.747826_g3424_i0 PRJNA846486 3506 624 9.747826 60.82643424 Cressdnaviricota sp. 2748378 Viruses Viruses 136 5.1799999999999986e-34   NR AXH74707.1 2748378 g3424 i0 39.7 0.836538461538462 174 86 83.7 3 70 591 68 222 AXH74707.1 MAG: Rep [Cressdnaviricota sp.] diamond 522 136 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
29612260 29612260 PRJNA846486_P_NODE_80450_length_167_cov_1.322034_g80354_i0 PRJNA846486 80450 167 1.322034 2.20779678 Cressdnaviricota sp. 2748378 Viruses Viruses 54.7 7.46e-7   NR WAE42279.1 2748378 g80354 i0 54.3 0.826347305389222 46 20 82.6 1 159 22 138 182 WAE42279.1 MAG: replication associated protein [Cressdnaviricota sp.] diamond 138 54.7 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
31191852 31191852 PRJNA846486_P_NODE_83455_length_166_cov_0.888889_g83359_i0 PRJNA846486 83455 166 0.888889 1.47555574 Cressdnaviricota sp. 2748378 Viruses Viruses 89.7 2.12e-19   NR AYP28916.1 2748378 g83359 i0 80.4 0.831325301204819 46 9 83.1 0 164 27 240 285 AYP28916.1 MAG: putative capsid protein [Cressdnaviricota sp.] diamond 138 89.7 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;