RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA846486" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA846486 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26683208 26683208 PRJNA846486_P_NODE_85941_length_165_cov_0.896552_g85845_i0 PRJNA846486 85941 165 0.896552 1.4793108 Viruses 10239 Viruses Viruses 45.8 0.00104   NR QKK82944.1 2739858 g85845 i0 54.5 1.21818181818182 33 13 56.4 1 72 164 173 205 QKK82944.1 hypothetical protein 3 [Forsythia suspensa parvo-like virus] diamond 201 45.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Forsythia suspensa parvo-like virus
29422957 29422957 PRJNA846486_P_NODE_67609_length_177_cov_0.984375_g67513_i0 PRJNA846486 67609 177 0.984375 1.74234375 Parvoviridae sp. 1940570 Viruses Viruses 42 0.0286   NR XNT20757.1 1940570 g67513 i0 50 0.610169491525424 36 18 61 0 109 2 366 401 XNT20757.1 MAG: replication protein [Parvoviridae sp.] diamond 108 42 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
29801974 29801974 PRJNA846486_P_NODE_11651_length_364_cov_2.895238_g11556_i0 PRJNA846486 11651 364 2.895238 10.53866632 Phylloscopus proregulus parvoviridae sp. 2794532 Viruses Viruses 83.6 7.41e-16   NR QTE04069.1 2794532 g11556 i0 53.1 0.667582417582418 81 37 65.9 1 364 125 559 639 QTE04069.1 MAG: VP [Phylloscopus proregulus parvoviridae sp.] diamond 243 83.6 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phylloscopus proregulus parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;