RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA846486" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA846486 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28539324 28539324 PRJNA846486_P_NODE_23087_length_269_cov_2.090909_g22991_i0 PRJNA846486 23087 269 2.090909 5.62454521 Qianjiang tombus-like virus 56 3348124 Viruses Viruses 51.2 4.89e-5   NR XHA86470.1 3348124 g22991 i0 40.3 0.858736059479554 77 43 82.5 1 263 42 253 329 XHA86470.1 MAG: hypothetical protein [Qianjiang tombus-like virus 56] diamond 231 51.2 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Qianjiang tombus-like virus 56
29422952 29422952 PRJNA846486_P_NODE_42049_length_211_cov_1.925926_g41953_i0 PRJNA846486 42049 211 1.925926 4.06370386 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 50.1 6.62e-5   NR XCM68141.1 3003959 g41953 i0 64.9 0.5260663507109 37 13 52.6 0 207 97 1875 1911 XCM68141.1 MAG: polyprotein, partial [Picornavirales sp.] diamond 111 50.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32521143 32521143 PRJNA846486_P_NODE_16559_length_310_cov_1.624521_g16463_i0 PRJNA846486 16559 310 1.624521 5.0360151 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 156 1.19e-41   NR UNY42121.1 3003959 g16463 i0 67.6 0.987096774193548 102 33 98.7 0 308 3 990 1091 UNY42121.1 MAG: polyprotein 1 [Picornavirales sp.] diamond 306 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
32615557 32615557 PRJNA846486_P_NODE_7680_length_441_cov_2.928571_g7586_i0 PRJNA846486 7680 441 2.928571 12.91499811 Ripoglor virus 3130730 Viruses Viruses 50.4 6.19e-4   NR WZH60210.1 3130730 g7586 i0 44.6 0.380952380952381 56 31 38.1 0 436 269 956 1011 WZH60210.1 MAG: RNA-dependent RNA polymerase [Ripoglor virus] diamond 168 50.4 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripoglor virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;