RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA846110" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA846110 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26651417 26651417 PRJNA846110_P_NODE_23361_length_250_cov_0.870056_g23116_i0 PRJNA846110 23361 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 63.5 1.91e-9   NR HTW81267.1 1964191 g23116 i0 46.6 1.776 73 36 86.4 2 16 231 198 268 HTW81267.1 acyltransferase family protein [Terracidiphilus sp.] diamond 444 63.9 0.993740219092332 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
26801483 26801483 PRJNA846110_P_NODE_16721_length_279_cov_1.388350_g16476_i0 PRJNA846110 16721 279 1.38835 3.8734965 Blastocatellia bacterium 2052146 Bacteria Bacteria 90.9 6.9e-19   NR MBX7223318.1 2052146 g16476 i0 58.7 0.989247311827957 92 38 98.9 0 278 3 823 914 MBX7223318.1 carboxypeptidase regulatory-like domain-containing protein [Blastocatellia bacterium] diamond 276 90.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27718573 27718573 PRJNA846110_P_NODE_14964_length_287_cov_2.453271_g14719_i0 PRJNA846110 14964 287 2.453271 7.04088777 Bryobacterales bacterium 2026791 Bacteria Bacteria 194 6.520000000000001e-59   NR MSV31675.1 2026791 g14719 i0 93.7 4.96515679442509 95 6 99.3 0 285 1 66 160 MSV31675.1 DUF1501 domain-containing protein [Bryobacterales bacterium] diamond 1425 194 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
28191533 28191533 PRJNA846110_P_NODE_27766_length_244_cov_0.900585_g27521_i0 PRJNA846110 27766 244 0.900585 2.1974274 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 80.5 1.47e-15   NR HWE00483.1 2212468 g27521 i0 60.3 1.72131147540984 58 23 71.3 0 242 69 154 211 HWE00483.1 glycosyltransferase [Bryobacteraceae bacterium] diamond 420 80.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28326317 28326317 PRJNA846110_P_NODE_17486_length_275_cov_1.940594_g17241_i0 PRJNA846110 17486 275 1.940594 5.3366335 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 105 3.7799999999999996e-24   NR HST24295.1 2052146 g17241 i0 93.9 11.2036363636364 49 3 53.5 0 127 273 1 49 HST24295.1 hypothetical protein [Blastocatellia bacterium] diamond 3081 106 0.990566037735849 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28854649 28854649 PRJNA846110_P_NODE_30808_length_231_cov_2.405063_g30563_i0 PRJNA846110 30808 231 2.405063 5.55569553 Edaphobacter sp. 1934404 Bacteria Bacteria 143 2.45e-40   NR WP_299371629.1 1934404 g30563 i0 91.3 0.896103896103896 69 6 89.6 0 212 6 2 70 WP_299371629.1 DUF692 domain-containing protein [Edaphobacter sp.] diamond 207 143 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
29810337 29810337 PRJNA846110_P_NODE_17371_length_276_cov_1.354680_g17126_i0 PRJNA846110 17371 276 1.35468 3.7389168 Bacteria 2 Bacteria Bacteria 119 4.6899999999999994e-30   NR MBZ5646461.1 2081523 g17126 i0 80.6 3.90217391304348 72 14 78.3 0 3 218 304 375 MBZ5646461.1 SAM-dependent methyltransferase [Terriglobia bacterium] diamond 1077 120 0.991666666666667 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;