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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA846110" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 22 ✖

bioproject 1

  • PRJNA846110 · 22 ✖

analysis 1

  • diamond · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5936217 5936217 PRJNA846110_P_NODE_22745_length_251_cov_0.865169_g22500_i0 PRJNA846110 22745 251 0.865169 2.17157419 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 106 2.97e-26   NR MDB5385041.1 2026779 g22500 i0 70.8 0.860557768924303 72 21 86.1 0 35 250 1 72 MDB5385041.1 hypothetical protein [Planctomycetaceae bacterium] diamond 216 106 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
21235046 21235046 PRJNA846110_P_NODE_15797_length_283_cov_2.161905_g15552_i0 PRJNA846110 15797 283 2.161905 6.11819115 Isosphaeraceae bacterium 2691532 Bacteria Bacteria 139 3.64e-38   NR MBX6312976.1 2691532 g15552 i0 62.3 2.41696113074205 114 17 93.3 1 3 266 192 305 MBX6312976.1 sugar phosphate isomerase/epimerase [Isosphaeraceae bacterium] diamond 684 139 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
26865182 26865182 PRJNA846110_P_NODE_29121_length_242_cov_0.964497_g28876_i0 PRJNA846110 29121 242 0.964497 2.33408274 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.3 0.00958   NR HRV81266.1 2026780 g28876 i0 40 2.25619834710744 65 34 75.6 3 38 220 54 117 HRV81266.1 alpha/beta fold hydrolase [Planctomycetota bacterium] diamond 546 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26991220 26991220 PRJNA846110_P_NODE_15442_length_285_cov_1.584906_g15197_i0 PRJNA846110 15442 285 1.584906 4.5169821 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 88.6 4.77e-18   NR HET6425812.1 2026779 g15197 i0 53.7 1 95 41 96.8 1 5 280 467 561 HET6425812.1 PQQ-binding-like beta-propeller repeat protein [Planctomycetaceae bacterium] diamond 285 88.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27402508 27402508 PRJNA846110_P_NODE_30543_length_237_cov_2.567073_g30298_i0 PRJNA846110 30543 237 2.567073 6.08396301 Planctomycetota bacterium 2026780 Bacteria Bacteria 60.1 1.4e-8   NR MCA8965807.1 2026780 g30298 i0 50 0.734177215189873 58 28 72.2 1 236 66 175 232 MCA8965807.1 class I SAM-dependent methyltransferase [Planctomycetota bacterium] diamond 174 60.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27411086 27411086 PRJNA846110_P_NODE_20403_length_261_cov_1.526596_g20158_i0 PRJNA846110 20403 261 1.526596 3.98441556 Candidatus Bathyanammoxibius 2983802 Bacteria Bacteria 43.1 0.0165   NR MEE9200699.1 2760054 g20158 i0 63.6 0.758620689655172 22 8 25.3 0 79 14 28 49 MEE9200699.1 cytochrome C [Candidatus Brocadiales bacterium] diamond 198 43.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales     Candidatus Brocadiales bacterium
28634039 28634039 PRJNA846110_P_NODE_21287_length_257_cov_0.956522_g21042_i0 PRJNA846110 21287 257 0.956522 2.45826154 Opitutales bacterium 2026772 Bacteria Bacteria 44.3 0.0119   NR HNX04777.1 2026772 g21042 i0 39.2 1.19066147859922 51 26 59.5 1 40 192 14 59 HNX04777.1 prepilin peptidase [Opitutales bacterium] diamond 306 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
28665506 28665506 PRJNA846110_P_NODE_22167_length_252_cov_1.474860_g21922_i0 PRJNA846110 22167 252 1.47486 3.7166472 Planctomycetota bacterium 2026780 Bacteria Bacteria 154 1.33e-41   NR RLS51729.1 2026780 g21922 i0 89.2 0.988095238095238 83 9 98.8 0 251 3 113 195 RLS51729.1 MAG: ATP-binding cassette domain-containing protein, partial [Planctomycetota bacterium] diamond 249 154 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29052800 29052800 PRJNA846110_P_NODE_24908_length_248_cov_0.880000_g24663_i0 PRJNA846110 24908 248 0.88 2.1824 Candidatus Similichlamydia 1348235 Bacteria Bacteria 152 1.95e-45   NR WP_275655994.1 1903953 g24663 i0 90.1 1.95967741935484 81 8 98 0 248 6 10 90 WP_275655994.1 Clp protease N-terminal domain-containing protein, partial [Candidatus Similichlamydia epinepheli] diamond 486 152 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Parilichlamydiaceae Candidatus Similichlamydia Candidatus Similichlamydia epinepheli
29612242 29612242 PRJNA846110_P_NODE_30630_length_235_cov_2.425926_g30385_i0 PRJNA846110 30630 235 2.425926 5.7009261 Roseimaritima sediminicola 2662066 Bacteria Bacteria 82 7.95e-17   NR WP_153557960.1 2662066 g30385 i0 52.7 2.01702127659574 74 35 94.5 0 234 13 101 174 WP_153557960.1 RsmE family RNA methyltransferase [Roseimaritima sediminicola] diamond 474 82 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Roseimaritima Roseimaritima sediminicola
29675383 29675383 PRJNA846110_P_NODE_16990_length_278_cov_1.141463_g16745_i0 PRJNA846110 16990 278 1.141463 3.17326714 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 143 2.0399999999999997e-37   NR MFO1497240.1 2026799 g16745 i0 80.4 0.992805755395683 92 18 99.3 0 1 276 54 145 MFO1497240.1 TonB-dependent receptor [Verrucomicrobiota bacterium] diamond 276 143 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29675389 29675389 PRJNA846110_P_NODE_22790_length_251_cov_0.865169_g22545_i0 PRJNA846110 22790 251 0.865169 2.17157419 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.00847   NR MEM1084950.1 2026799 g22545 i0 43.1 0.693227091633466 58 29 64.5 2 88 249 448 505 MEM1084950.1 LamG-like jellyroll fold domain-containing protein [Verrucomicrobiota bacterium] diamond 174 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30434263 30434263 PRJNA846110_P_NODE_28413_length_243_cov_0.905882_g28168_i0 PRJNA846110 28413 243 0.905882 2.20129326 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 131 2.73e-33   NR MDX1968795.1 2026779 g28168 i0 76.9 0.962962962962963 78 18 96.3 0 235 2 230 307 MDX1968795.1 glycosyl hydrolase family 28-related protein [Planctomycetaceae bacterium] diamond 234 131 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
30663456 30663456 PRJNA846110_P_NODE_24353_length_249_cov_0.875000_g24108_i0 PRJNA846110 24353 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 52.4 1.63e-5   NR WP_185659583.1 415222 g24108 i0 83.3 4.78313253012048 30 5 36.1 0 157 246 1 30 WP_185659583.1 DNA polymerase/3'-5' exonuclease PolX [Pelagicoccus albus] diamond 1191 52.8 0.992424242424242 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Pelagicoccaceae Pelagicoccus Pelagicoccus albus
30686515 30686515 PRJNA846110_P_NODE_23173_length_250_cov_1.299435_g22928_i0 PRJNA846110 23173 250 1.299435 3.2485875 Planctomycetota bacterium 2026780 Bacteria Bacteria 143 2.18e-38   NR RLS56198.1 2026780 g22928 i0 80.7 0.996 83 16 99.6 0 2 250 95 177 RLS56198.1 MAG: MFS transporter [Planctomycetota bacterium] diamond 249 143 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31540221 31540221 PRJNA846110_P_NODE_256_length_1768_cov_4.318584_g193_i0 PRJNA846110 256 1768 4.318584 76.35256512 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.4 0.0464   NR MEC9112036.1 2026799 g193 i0 36.5 0.0882352941176471 52 31 8.5 1 873 1022 16 67 MEC9112036.1 sugar phosphate isomerase/epimerase [Verrucomicrobiota bacterium] diamond 156 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31571915 31571915 PRJNA846110_P_NODE_16976_length_278_cov_1.209756_g16731_i0 PRJNA846110 16976 278 1.209756 3.36312168 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 155 1.27e-41   NR HMO26238.1 2876886 g16731 i0 78.3 2.97841726618705 92 20 99.3 0 3 278 127 218 HMO26238.1 ABC transporter permease subunit [Tepidisphaeraceae bacterium] diamond 828 155 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
31706674 31706674 PRJNA846110_P_NODE_28877_length_243_cov_0.905882_g28632_i0 PRJNA846110 28877 243 0.905882 2.20129326 Parachlamydiales 1963360 Bacteria Bacteria 55.5 1.21e-6   NR WP_108623814.1 1903953 g28632 i0 39.2 3.5679012345679 74 40 85.2 1 35 241 3 76 WP_108623814.1 tetratricopeptide repeat protein [Candidatus Similichlamydia epinepheli] diamond 867 55.8 0.99462365591397806 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Parilichlamydiaceae Candidatus Similichlamydia Candidatus Similichlamydia epinepheli
32173011 32173011 PRJNA846110_P_NODE_18298_length_271_cov_2.691919_g18053_i0 PRJNA846110 18298 271 2.691919 7.29510049 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 103 5.31e-25   NR MFN4174080.1 2052176 g18053 i0 69.4 0.686346863468635 62 19 68.6 0 188 3 1 62 MFN4174080.1 carotenoid oxygenase family protein [Parachlamydiaceae bacterium] diamond 186 103 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
32181372 32181372 PRJNA846110_P_NODE_22658_length_251_cov_0.865169_g22413_i0 PRJNA846110 22658 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 143 2.36e-39   NR MBX6315968.1 2691532 g22413 i0 81.9 1.9840637450199201 83 15 99.2 0 1 249 223 305 MBX6315968.1 chloromuconate cycloisomerase [Isosphaeraceae bacterium] diamond 498 143 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae   Isosphaeraceae bacterium
32236454 32236454 PRJNA846110_P_NODE_30878_length_229_cov_2.589744_g30633_i0 PRJNA846110 30878 229 2.589744 5.93051376 Brevifollis gellanilyticus 748831 Bacteria Bacteria 97.4 1.82e-21   NR WP_170266951.1 748831 g30633 i0 73 0.96943231441048 74 20 96.9 0 7 228 5239 5312 WP_170266951.1 autotransporter-associated beta strand repeat-containing protein [Brevifollis gellanilyticus] diamond 222 97.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
32457740 32457740 PRJNA846110_P_NODE_28559_length_243_cov_0.905882_g28314_i0 PRJNA846110 28559 243 0.905882 2.20129326 Fimbriiglobus ruber 1908690 Bacteria Bacteria 54.3 4.46e-7   NR WP_088258636.1 1908690 g28314 i0 38.5 0.962962962962963 78 42 93.8 2 238 11 39 112 WP_088258636.1 hypothetical protein [Fimbriiglobus ruber] diamond 234 54.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Fimbriiglobus Fimbriiglobus ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;