RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA841653" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA841653 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5933345 5933345 PRJNA841653_P_NODE_19565_length_369_cov_1.496622_g18893_i0 PRJNA841653 19565 369 1.496622 5.52253518 Opisthokonta 33154 Mollusca Mollusca 145 1.03e-42   NR XP_046335941.1 6454 g18893 i0 72 16.609756097561 93 26 75.6 0 49 327 1 93 XP_046335941.1 60S ribosomal protein L37-like [Haliotis rufescens] diamond 6129 146 0.993150684931507 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
26643012 26643012 PRJNA841653_P_NODE_29161_length_302_cov_0.991266_g28487_i0 PRJNA841653 29161 302 0.991266 2.99362332 Liolophura japonica 13599 Mollusca Mollusca 47.8 0.00135   NR XP_064605195.1 13599 g28487 i0 62.1 2.25496688741722 29 11 28.8 0 216 302 802 830 XP_064605195.1 neurogenic locus notch homolog protein 1-like [Liolophura japonica] diamond 681 47.8 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
26936524 26936524 PRJNA841653_P_NODE_56962_length_244_cov_0.900585_g56288_i0 PRJNA841653 56962 244 0.900585 2.1974274 Ostreidae 6563 Mollusca Mollusca 55.1 1.61e-6   NR XP_011437841.3 29159 g56288 i0 54.2 3.57786885245902 48 22 59 0 215 72 311 358 XP_011437841.3 hydroxyproline dehydrogenase [Magallana gigas] diamond 873 55.1 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
26959610 26959610 PRJNA841653_P_NODE_46582_length_249_cov_1.397727_g45908_i0 PRJNA841653 46582 249 1.397727 3.48034023 Mytilus coruscus 42192 Mollusca Mollusca 73.2 7.64e-13   NR CAC5424730.1 42192 g45908 i0 52.4 16.6987951807229 63 30 75.9 0 54 242 816 878 CAC5424730.1 Retrovirus-related Pol polyprotein from transposon 297 [Mytilus coruscus] diamond 4158 73.2 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
27434175 27434175 PRJNA841653_P_NODE_49683_length_248_cov_0.880000_g49009_i0 PRJNA841653 49683 248 0.88 2.1824 Magallana angulata 2784310 Mollusca Mollusca 42.7 0.0402   NR XP_052699955.1 2784310 g49009 i0 38.1 0.762096774193548 63 39 76.2 0 211 23 12 74 XP_052699955.1 CWF19-like protein 2 [Magallana angulata] diamond 189 42.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana angulata
27497164 27497164 PRJNA841653_P_NODE_30583_length_294_cov_3.167421_g29909_i0 PRJNA841653 30583 294 3.167421 9.31221774 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0348   NR XP_067657806.1 109174 g29909 i0 35.4 1.30612244897959 65 36 65.3 2 237 46 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
28294835 28294835 PRJNA841653_P_NODE_52026_length_246_cov_0.890173_g51352_i0 PRJNA841653 52026 246 0.890173 2.18982558 Metazoa 33208 Mollusca Mollusca 67.4 8.21e-11   NR XP_052815901.1 6604 g51352 i0 45.7 19.6707317073171 70 35 81.7 1 19 219 23 92 XP_052815901.1 TBC domain-containing protein kinase-like protein [Mya arenaria] diamond 4839 67.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
29242139 29242139 PRJNA841653_P_NODE_49969_length_247_cov_1.431034_g49295_i0 PRJNA841653 49969 247 1.431034 3.53465398 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 6.38e-17   NR KAH3730688.1 45954 g49295 i0 57.6 10.2753036437247 66 27 78.9 1 209 15 774 839 KAH3730688.1 hypothetical protein DPMN_056680 [Dreissena polymorpha] diamond 2538 84.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
29336873 29336873 PRJNA841653_P_NODE_45329_length_250_cov_0.870056_g44655_i0 PRJNA841653 45329 250 0.870056 2.17514 Metazoa 33208 Mollusca Mollusca 112 1.62e-26   NR XP_033763152.1 6579 g44655 i0 56.8 5.82 81 35 97.2 0 244 2 521 601 XP_033763152.1 methylenetetrahydrofolate reductase-like [Pecten maximus] diamond 1455 113 0.991150442477876 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
30789821 30789821 PRJNA841653_P_NODE_38254_length_266_cov_1.958549_g37580_i0 PRJNA841653 38254 266 1.958549 5.20974034 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.3 1.39e-15   NR KAK6169422.1 87958 g37580 i0 50.6 6.68796992481203 85 40 94.7 2 13 264 683 766 KAK6169422.1 hypothetical protein SNE40_020482 [Patella caerulea] diamond 1779 82 0.991463414634146 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella caerulea
30916405 30916405 PRJNA841653_P_NODE_41854_length_255_cov_1.390110_g41180_i0 PRJNA841653 41854 255 1.39011 3.5447805 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 64.3 1.08e-9   NR CAC5424730.1 42192 g41180 i0 60.9 16.8235294117647 46 18 54.1 0 62 199 854 899 CAC5424730.1 Retrovirus-related Pol polyprotein from transposon 297 [Mytilus coruscus] diamond 4290 64.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus coruscus
31286869 31286869 PRJNA841653_P_NODE_43535_length_251_cov_0.865169_g42861_i0 PRJNA841653 43535 251 0.865169 2.17157419 Elysia chlorotica 188477 Mollusca Mollusca 55.8 3.95e-7   NR RUS88897.1 188477 g42861 i0 43.7 0.848605577689243 71 28 84.9 2 247 35 57 115 RUS88897.1 hypothetical protein EGW08_003336 [Elysia chlorotica] diamond 213 55.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;