RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA841653" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA841653 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30149282 30149282 PRJNA841653_P_NODE_20252_length_362_cov_4.373702_g19578_i0 PRJNA841653 20252 362 4.373702 15.83280124 Pancytospora epiphaga 1938578 Fungi Fungi 65.1 2.03e-9   NR KAI5177932.1 1938578 g19578 i0 64 0.414364640883978 50 18 41.4 0 209 60 9 58 KAI5177932.1 hypothetical protein PAEPH01_2511, partial [Pancytospora epiphaga] diamond 150 65.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Pancytospora Pancytospora epiphaga
30402694 30402694 PRJNA841653_P_NODE_47973_length_249_cov_0.875000_g47299_i0 PRJNA841653 47973 249 0.875 2.17875 Nosema granulosis 83296 Fungi Fungi 48.1 5.05e-4   NR KAF9760552.1 83296 g47299 i0 48.7 0.939759036144578 39 20 47 0 190 74 584 622 KAF9760552.1 Retrovirus-related Pol polyprotein from transposon, partial [Nosema granulosis] diamond 234 48.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
32867278 32867278 PRJNA841653_P_NODE_15660_length_415_cov_1.599415_g14988_i0 PRJNA841653 15660 415 1.599415 6.63757225 Dictyocoela roeselum 288439 Fungi Fungi 90.1 6.83e-18   NR KAG0420334.1 288439 g14988 i0 38.7 5.72530120481928 137 79 96.1 3 403 5 514 649 KAG0420334.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Dictyocoela roeselum] diamond 2376 90.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela roeselum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;