contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA841653" and tax_phylum = "Bdellovibrionota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14858164 | 14858164 | PRJNA841653_P_NODE_22072_length_347_cov_1.069343_g21398_i0 | PRJNA841653 | 22072 | 347 | 1.069343 | 3.71062021 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 57.8 | 3.88e-7 | NR | MDW8190275.1 | 2026715 | g21398 | i0 | 45.9 | 0.734870317002882 | 85 | 36 | 72.6 | 3 | 342 | 91 | 4 | 79 | MDW8190275.1 delta-60 repeat domain-containing protein [Pseudobdellovibrionaceae bacterium] | diamond | 255 | 57.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 16133637 | 16133637 | PRJNA841653_P_NODE_59053_length_242_cov_1.775148_g58379_i0 | PRJNA841653 | 59053 | 242 | 1.775148 | 4.29585816 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 102 | 6.92e-24 | NR | OFY98961.1 | 1797385 | g58379 | i0 | 61.5 | 6.60743801652893 | 78 | 30 | 96.7 | 0 | 237 | 4 | 194 | 271 | OFY98961.1 MAG: hypothetical protein A2Z97_14410 [Bdellovibrionales bacterium GWB1_52_6] | diamond | 1599 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium GWB1_52_6 | ||||
| 26611337 | 26611337 | PRJNA841653_P_NODE_49301_length_248_cov_0.880000_g48627_i0 | PRJNA841653 | 49301 | 248 | 0.88 | 2.1824 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 110 | 1.7500000000000002e-26 | NR | MCB0369454.1 | 2053517 | g48627 | i0 | 69.6 | 0.955645161290323 | 79 | 24 | 95.6 | 0 | 5 | 241 | 109 | 187 | MCB0369454.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 237 | 110 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28759965 | 28759965 | PRJNA841653_P_NODE_50927_length_247_cov_0.885057_g50253_i0 | PRJNA841653 | 50927 | 247 | 0.885057 | 2.18609079 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 100 | 1.4000000000000002e-22 | NR | MDR3606531.1 | 2599941 | g50253 | i0 | 73.8 | 1.40890688259109 | 61 | 16 | 74.1 | 0 | 11 | 193 | 50 | 110 | MDR3606531.1 DEAD/DEAH box helicase [Oligoflexia bacterium] | diamond | 348 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 29075958 | 29075958 | PRJNA841653_P_NODE_51188_length_247_cov_0.885057_g50514_i0 | PRJNA841653 | 51188 | 247 | 0.885057 | 2.18609079 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 135 | 8.26e-38 | NR | MCK6594478.1 | 2081706 | g50514 | i0 | 83.5 | 0.959514170040486 | 79 | 13 | 96 | 0 | 2 | 238 | 46 | 124 | MCK6594478.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 237 | 135 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 29296825 | 29296825 | PRJNA841653_P_NODE_52569_length_246_cov_0.890173_g51895_i0 | PRJNA841653 | 52569 | 246 | 0.890173 | 2.18982558 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 139 | 1.86e-39 | NR | MBL7544873.1 | 2026715 | g51895 | i0 | 97.5 | 0.975609756097561 | 80 | 2 | 97.6 | 0 | 242 | 3 | 5 | 84 | MBL7544873.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] | diamond | 240 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 29391646 | 29391646 | PRJNA841653_P_NODE_56169_length_244_cov_0.900585_g55495_i0 | PRJNA841653 | 56169 | 244 | 0.900585 | 2.1974274 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 90.9 | 6.28e-20 | NR | MBS1984201.1 | 2053517 | g55495 | i0 | 55 | 0.983606557377049 | 80 | 33 | 94.7 | 1 | 14 | 244 | 137 | 216 | MBS1984201.1 GNAT family N-acetyltransferase [Bdellovibrionales bacterium] | diamond | 240 | 90.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29580650 | 29580650 | PRJNA841653_P_NODE_46030_length_250_cov_0.870056_g45356_i0 | PRJNA841653 | 46030 | 250 | 0.870056 | 2.17514 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 105 | 9.96e-25 | NR | WP_325145540.1 | 1971216 | g45356 | i0 | 72 | 0.984 | 82 | 23 | 98.4 | 0 | 248 | 3 | 209 | 290 | WP_325145540.1 flagellar hook assembly protein FlgD [Oligoflexus sp.] | diamond | 246 | 105 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 30528554 | 30528554 | PRJNA841653_P_NODE_23793_length_334_cov_1.145594_g23119_i0 | PRJNA841653 | 23793 | 334 | 1.145594 | 3.82628396 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 148 | 2.849999999999999e-43 | NR | MCB0368309.1 | 2053517 | g23119 | i0 | 73.3 | 0.94311377245509 | 105 | 28 | 94.3 | 0 | 315 | 1 | 1 | 105 | MCB0368309.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 315 | 148 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31792848 | 31792848 | PRJNA841653_P_NODE_50657_length_247_cov_0.885057_g49983_i0 | PRJNA841653 | 50657 | 247 | 0.885057 | 2.18609079 | Bdellovibrio svalbardensis | 2972972 | Bacteria | Bacteria | 57 | 3.51e-7 | NR | WP_277578531.1 | 2972972 | g49983 | i0 | 46.3 | 0.995951417004049 | 82 | 39 | 98.4 | 2 | 3 | 245 | 6 | 83 | WP_277578531.1 CFI-box-CTERM domain-containing protein [Bdellovibrio svalbardensis] | diamond | 246 | 57 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio svalbardensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;