RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA841653" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA841653 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7208201 7208201 PRJNA841653_P_NODE_10026_length_529_cov_2.385965_g9359_i0 PRJNA841653 10026 529 2.385965 12.62175485 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 196 2.58e-60   NR OEH76901.1 88456 g9359 i0 62.8 14.5689981096408 172 64 97.5 0 521 6 27 198 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 7707 196 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
22506953 22506953 PRJNA841653_P_NODE_18018_length_385_cov_1.381410_g17346_i0 PRJNA841653 18018 385 1.38141 5.3184285 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 159 1.6e-44   NR XP_004830458.1 1537102 g17346 i0 58.9 0.966233766233766 124 50 96.6 1 6 377 86 208 XP_004830458.1 60S ribosomal protein L3, putative [Theileria equi strain WA] diamond 372 159 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
28759971 28759971 PRJNA841653_P_NODE_63427_length_233_cov_2.443750_g62753_i0 PRJNA841653 63427 233 2.44375 5.6939375 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 39.7 0.0496   NR XP_013235979.1 5802 g62753 i0 53.8 0.502145922746781 39 18 50.2 0 100 216 15 53 XP_013235979.1 uncharacterized protein ETH_00032375, partial [Eimeria tenella] diamond 117 39.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
31982796 31982796 PRJNA841653_P_NODE_13198_length_454_cov_1.850394_g12527_i0 PRJNA841653 13198 454 1.850394 8.40078876 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 197 6.92e-61   NR OEH76901.1 88456 g12527 i0 68.7 4.81718061674009 147 46 97.1 0 446 6 27 173 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2187 197 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;