RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA841653" and tax_kingdom = "Shotokuvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 6 ✖

bioproject 1

  • PRJNA841653 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8482930 8482930 PRJNA841653_P_NODE_16107_length_409_cov_0.839286_g15435_i0 PRJNA841653 16107 409 0.839286 3.43267974 Cressdnaviricota sp. 2748378 Viruses Viruses 115 4.45e-28   NR AXH74571.1 2748378 g15435 i0 70.6 0.623471882640587 85 23 60.9 1 407 159 236 320 AXH74571.1 MAG: putative viral replication protein [Cressdnaviricota sp.] diamond 255 115 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
27086379 27086379 PRJNA841653_P_NODE_51182_length_247_cov_0.885057_g50508_i0 PRJNA841653 51182 247 0.885057 2.18609079 Cressdnaviricota sp. 2748378 Viruses Viruses 50.8 4.09e-5   NR WCB70604.1 2748378 g50508 i0 50.9 0.668016194331984 55 27 66.8 0 180 16 1 55 WCB70604.1 Cap [Cressdnaviricota sp.] diamond 165 50.8 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
28317983 28317983 PRJNA841653_P_NODE_36106_length_274_cov_0.965174_g35432_i0 PRJNA841653 36106 274 0.965174 2.64457676 Cressdnaviricota sp. 2748378 Viruses Viruses 68.2 3.41e-11   NR AXQ65561.1 2748378 g35432 i0 41.9 0.941605839416058 86 46 90.9 2 16 264 15 99 AXQ65561.1 MAG: putative replicase [Cressdnaviricota sp.] diamond 258 68.2 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
29328286 29328286 PRJNA841653_P_NODE_15089_length_423_cov_1.291429_g14417_i0 PRJNA841653 15089 423 1.291429 5.46274467 Dragonfly larvae associated circular virus-1 1454021 Viruses Viruses 167 1.1799999999999998e-47   NR ALE29826.1 1454022 g14417 i0 62.6 0.872340425531915 123 46 87.2 0 54 422 4 126 ALE29826.1 replication associated protein [Dragonfly larvae associated circular virus-10] diamond 369 167 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Mulpavirales Anicreviridae Manawavirus Manawavirus kapowais
32204439 32204439 PRJNA841653_P_NODE_59038_length_242_cov_1.792899_g58364_i0 PRJNA841653 59038 242 1.792899 4.33881558 Cressdnaviricota sp. 2748378 Viruses Viruses 63.2 1.84e-9   NR AXQ65562.1 2748378 g58364 i0 46.3 0.830578512396694 67 32 83.1 1 237 37 251 313 AXQ65562.1 MAG: putative capsid protein [Cressdnaviricota sp.] diamond 201 63.2 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
32615495 32615495 PRJNA841653_P_NODE_7860_length_604_cov_1.397363_g7202_i0 PRJNA841653 7860 604 1.397363 8.44007252 Littorina sp. associated circular virus 1692253 Viruses Viruses 236 1.58e-73   NR YP_009163904.1 1692253 g7202 i0 57.4 0.978476821192053 197 84 97.8 0 9 599 118 314 YP_009163904.1 putative replication initiation protein [Littorina sp. associated circular virus] diamond 591 236 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales Circoviridae   Littorina sp. associated circular virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;