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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA841653" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA841653 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
830772 830772 PRJNA841653_P_NODE_50321_length_247_cov_0.885057_g49647_i0 PRJNA841653 50321 247 0.885057 2.18609079 Evosea 2605435 Evosea other_Eukaryota 122 2.7e-30   NR XP_020435784.1 670386 g49647 i0 78 3.95951417004049 82 18 99.6 0 2 247 401 482 XP_020435784.1 cullin A [Heterostelium album PN500] diamond 978 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
14858302 14858302 PRJNA841653_P_NODE_28712_length_304_cov_1.303030_g28038_i0 PRJNA841653 28712 304 1.30303 3.9612112 Physarum polycephalum 5791 Evosea other_Eukaryota 154 3.13e-44   NR ABL84200.1 5791 g28038 i0 79 2.96052631578947 100 21 98.7 0 302 3 19 118 ABL84200.1 14-3-3-like protein [Physarum polycephalum] diamond 900 154 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
23783026 23783026 PRJNA841653_P_NODE_46139_length_250_cov_0.870056_g45465_i0 PRJNA841653 46139 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 1.26e-24   NR XP_004333651.1 1257118 g45465 i0 57.3 2.94 82 32 96 2 10 249 230 310 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 735 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26769855 26769855 PRJNA841653_P_NODE_51741_length_246_cov_1.728324_g51067_i0 PRJNA841653 51741 246 1.728324 4.25167704 Polysphondylium violaceum 133409 Evosea other_Eukaryota 59.7 4.07e-8   NR KAF2076390.1 133409 g51067 i0 42.5 0.975609756097561 80 44 97.6 2 3 242 294 371 KAF2076390.1 hypothetical protein CYY_002295 [Polysphondylium violaceum] diamond 240 59.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
26810044 26810044 PRJNA841653_P_NODE_63121_length_237_cov_2.213415_g62447_i0 PRJNA841653 63121 237 2.213415 5.24579355 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 64.3 8.68e-10   NR KYR00680.1 361077 g62447 i0 42.7 3.06329113924051 75 43 94.9 0 227 3 106 180 KYR00680.1 filopodin [Tieghemostelium lacteum] diamond 726 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
26841870 26841870 PRJNA841653_P_NODE_17821_length_387_cov_1.391720_g17149_i0 PRJNA841653 17821 387 1.39172 5.3859564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.1 0.0022   NR AFD36246.1 5755 g17149 i0 38.7 5.03875968992248 75 40 55.8 2 285 70 375 446 AFD36246.1 protein kinase C17 [Acanthamoeba castellanii] diamond 1950 48.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27054780 27054780 PRJNA841653_P_NODE_44162_length_251_cov_0.865169_g43488_i0 PRJNA841653 44162 251 0.865169 2.17157419 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84 1.25e-16   NR PRP78361.1 1890364 g43488 i0 50.6 0.920318725099602 77 38 92 0 13 243 313 389 PRP78361.1 calcium-binding protein [Planoprotostelium fungivorum] diamond 231 84 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28570522 28570522 PRJNA841653_P_NODE_51507_length_247_cov_0.885057_g50833_i0 PRJNA841653 51507 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 7.91e-24   NR XP_004334790.1 1257118 g50833 i0 56.6 0.923076923076923 76 33 92.3 0 19 246 144 219 XP_004334790.1 tryptophan-tRNA ligase [Acanthamoeba castellanii str. Neff] diamond 228 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28728509 28728509 PRJNA841653_P_NODE_54587_length_245_cov_0.895349_g53913_i0 PRJNA841653 54587 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 107 7.64e-25   NR PRP73583.1 1890364 g53913 i0 59.5 0.96734693877551 79 32 96.7 0 241 5 15 93 PRP73583.1 cryptochrome DASH-like [Planoprotostelium fungivorum] diamond 237 107 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29517731 29517731 PRJNA841653_P_NODE_55890_length_244_cov_0.900585_g55216_i0 PRJNA841653 55890 244 0.900585 2.1974274 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 43.5 0.0206   NR PRP77761.1 1890364 g55216 i0 36.4 0.676229508196721 55 35 67.6 0 80 244 506 560 PRP77761.1 hypothetical protein PROFUN_14122 [Planoprotostelium fungivorum] diamond 165 43.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29936872 29936872 PRJNA841653_P_NODE_60091_length_242_cov_0.911243_g59417_i0 PRJNA841653 60091 242 0.911243 2.20520806 Acytosteliales 2058181 Evosea other_Eukaryota 51.2 3.73e-5   NR XP_004359171.1 261658 g59417 i0 37 1.83471074380165 73 41 90.5 2 22 240 275 342 XP_004359171.1 uncharacterized protein DFA_01202 [Cavenderia fasciculata] diamond 444 51.6 0.992248062015504 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30907930 30907930 PRJNA841653_P_NODE_51234_length_247_cov_0.885057_g50560_i0 PRJNA841653 51234 247 0.885057 2.18609079 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 140 4.87e-40   NR XP_004334642.1 1257118 g50560 i0 82.1 0.947368421052632 78 14 94.7 0 239 6 55 132 XP_004334642.1 Ras family GTPase [Acanthamoeba castellanii str. Neff] diamond 234 140 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31318575 31318575 PRJNA841653_P_NODE_45515_length_250_cov_0.870056_g44841_i0 PRJNA841653 45515 250 0.870056 2.17514 Dictyostelium purpureum 5786 Evosea other_Eukaryota 64.7 7.36e-10   NR XP_003289404.1 5786 g44841 i0 35.3 1.02 85 50 96 1 9 248 12 96 XP_003289404.1 component of scar regulatory complex [Dictyostelium purpureum] diamond 255 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31508572 31508572 PRJNA841653_P_NODE_45436_length_250_cov_0.870056_g44762_i0 PRJNA841653 45436 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.8 5.88e-11   NR XP_004339235.1 1257118 g44762 i0 60 0.72 60 24 72 0 203 24 169 228 XP_004339235.1 Signal transducer and activator of transcription STAT family protein [Acanthamoeba castellanii str. Neff] diamond 180 67.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32077820 32077820 PRJNA841653_P_NODE_61438_length_241_cov_0.916667_g60764_i0 PRJNA841653 61438 241 0.916667 2.20916747 Polysphondylium violaceum 133409 Evosea other_Eukaryota 55.1 1.61e-6   NR KAF2071646.1 133409 g60764 i0 37.7 0.95850622406639 77 43 89.6 1 23 238 123 199 KAF2071646.1 hypothetical protein CYY_007039 [Polysphondylium violaceum] diamond 231 55.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32394330 32394330 PRJNA841653_P_NODE_62319_length_241_cov_0.916667_g61645_i0 PRJNA841653 62319 241 0.916667 2.20916747 Cavenderia fasciculata 261658 Evosea other_Eukaryota 61.6 8.25e-9   NR XP_004359939.1 261658 g61645 i0 41.7 1.54356846473029 60 32 71 1 49 219 912 971 XP_004359939.1 putative guanine nucleotide exchange factor [Cavenderia fasciculata] diamond 372 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;