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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA839281" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 9 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA839281 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26737711 26737711 PRJNA839281_S_NODE_15121_length_208_cov_1.345912_g14852_i0 PRJNA839281 15121 208 1.345912 2.79949696 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 61.2 5.17e-9   NR WP_296864657.1 253161 g14852 i0 39.4 1.93269230769231 66 40 95.2 0 8 205 184 249 WP_296864657.1 phosphotransferase [uncultured Methanobrevibacter sp.] diamond 402 61.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
27749911 27749911 PRJNA839281_S_NODE_33964_length_163_cov_0.894737_g33695_i0 PRJNA839281 33964 163 0.894737 1.45842131 Halobacteriales archaeon 1904752 Archaea Archaea 42.7 0.0129   NR MFB6299259.1 1904752 g33695 i0 42.3 0.957055214723926 52 28 95.7 1 7 162 102 151 MFB6299259.1 tail fiber domain-containing protein [Halobacteriales archaeon] diamond 156 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
28697060 28697060 PRJNA839281_S_NODE_32467_length_164_cov_0.886957_g32198_i0 PRJNA839281 32467 164 0.886957 1.45460948 archaeon 1906665 Archaea Archaea 57 1.1e-7   NR RYH29251.1 1906665 g32198 i0 50 2.8719512195122 52 26 95.1 0 157 2 122 173 RYH29251.1 MAG: oxaloacetate-decarboxylating malate dehydrogenase [archaeon] diamond 471 57 1 Archaea               archaeon
29454256 29454256 PRJNA839281_S_NODE_19990_length_186_cov_1.116788_g19721_i0 PRJNA839281 19990 186 1.116788 2.07722568 archaeon 1906665 Archaea Archaea 49.3 8.63e-5   NR NCQ52296.1 1906665 g19721 i0 45.9 0.983870967741935 61 33 98.4 0 1 183 196 256 NCQ52296.1 ATP-binding protein [archaeon] diamond 183 49.3 1 Archaea               archaeon
29485990 29485990 PRJNA839281_S_NODE_13170_length_221_cov_0.889535_g12901_i0 PRJNA839281 13170 221 0.889535 1.96587235 archaeon 1906665 Archaea Archaea 71.2 1.72e-12   NR RYH29251.1 1906665 g12901 i0 58.1 0.841628959276018 62 26 84.2 0 214 29 263 324 RYH29251.1 MAG: oxaloacetate-decarboxylating malate dehydrogenase [archaeon] diamond 186 71.2 1 Archaea               archaeon
29738553 29738553 PRJNA839281_S_NODE_34090_length_163_cov_0.894737_g33821_i0 PRJNA839281 34090 163 0.894737 1.45842131 archaeon 1906665 Archaea Archaea 76.3 2.45e-15   NR NCP98223.1 1906665 g33821 i0 63 0.993865030674847 54 20 99.4 0 1 162 77 130 NCP98223.1 ribonuclease HII [archaeon] diamond 162 76.3 1 Archaea               archaeon
29896856 29896856 PRJNA839281_S_NODE_34131_length_163_cov_0.894737_g33862_i0 PRJNA839281 34131 163 0.894737 1.45842131 archaeon 1906665 Archaea Archaea 43.9 0.00494   NR NCQ52235.1 1906665 g33862 i0 46.8 0.865030674846626 47 25 86.5 0 159 19 214 260 NCQ52235.1 3',5'-cyclic nucleotide phosphodiesterase [archaeon] diamond 141 43.9 1 Archaea               archaeon
30276145 30276145 PRJNA839281_S_NODE_27472_length_167_cov_0.864407_g27203_i0 PRJNA839281 27472 167 0.864407 1.44355969 archaeon 1906665 Archaea Archaea 51.2 1.05e-5   NR NCQ51643.1 1906665 g27203 i0 38.9 0.970059880239521 54 33 97 0 166 5 35 88 NCQ51643.1 hypothetical protein [archaeon] diamond 162 51.2 1 Archaea               archaeon
30497135 30497135 PRJNA839281_S_NODE_31833_length_164_cov_0.886957_g31564_i0 PRJNA839281 31833 164 0.886957 1.45460948 Haloarcula nitratireducens 2487749 Archaea Archaea 74.3 7.29e-14   NR WP_220582709.1 2487749 g31564 i0 59.3 0.98780487804878 54 22 98.8 0 164 3 211 264 WP_220582709.1 LEA type 2 family protein [Haloarcula nitratireducens] diamond 162 74.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula nitratireducens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;