RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA839281" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA839281 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27497154 27497154 PRJNA839281_S_NODE_32643_length_164_cov_0.886957_g32374_i0 PRJNA839281 32643 164 0.886957 1.45460948 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 74.7 2.2e-15   NR KAJ4456515.1 342808 g32374 i0 64.8 0.98780487804878 54 17 98.8 1 2 163 70 121 KAJ4456515.1 hypothetical protein PAPYR_8254 [Paratrimastix pyriformis] diamond 162 74.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28096952 28096952 PRJNA839281_S_NODE_30705_length_165_cov_0.879310_g30436_i0 PRJNA839281 30705 165 0.87931 1.4508615 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 66.2 6.81e-11   NR KAK2958232.1 2049346 g30436 i0 59.3 12.8181818181818 54 20 98.2 1 1 162 405 456 KAK2958232.1 Multidrug resistance-associated protein [Blattamonas nauphoetae] diamond 2115 66.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
29391628 29391628 PRJNA839281_S_NODE_17369_length_197_cov_1.033784_g17100_i0 PRJNA839281 17369 197 1.033784 2.03655448 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 63.9 6.92e-10   NR KAJ4456954.1 342808 g17100 i0 46.3 0.822335025380711 54 29 82.2 0 15 176 6456 6509 KAJ4456954.1 putative low-density lipoprotein receptor-related protein [Paratrimastix pyriformis] diamond 162 63.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;