RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA839281" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA839281 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3380352 3380352 PRJNA839281_S_NODE_14263_length_213_cov_1.554878_g13994_i0 PRJNA839281 14263 213 1.554878 3.31189014 Neorhodopirellula lusitana 445327 Bacteria Bacteria 103 1.11e-24   NR WP_404308400.1 445327 g13994 i0 64.8 1 71 24 98.6 1 4 213 106 176 WP_404308400.1 NADPH-dependent aldehyde reductase Ahr [Neorhodopirellula lusitana] diamond 213 103 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Neorhodopirellula Neorhodopirellula lusitana
4658175 4658175 PRJNA839281_S_NODE_30824_length_165_cov_0.879310_g30555_i0 PRJNA839281 30824 165 0.87931 1.4508615 Tautonia marina 2653855 Bacteria Bacteria 103 3.66e-24   NR WP_201750339.1 2653855 g30555 i0 92.7 1 55 4 100 0 1 165 249 303 WP_201750339.1 efflux RND transporter permease subunit [Tautonia marina] diamond 165 103 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Tautonia Tautonia marina
26706217 26706217 PRJNA839281_S_NODE_15361_length_207_cov_0.962025_g15092_i0 PRJNA839281 15361 207 0.962025 1.99139175 Planctomycetota bacterium 2026780 Bacteria Bacteria 64.7 3.46e-11   NR MBM4055472.1 2026780 g15092 i0 54.5 4.89855072463768 55 25 79.7 0 9 173 45 99 MBM4055472.1 hemin receptor [Planctomycetota bacterium] diamond 1014 64.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27884393 27884393 PRJNA839281_S_NODE_8025_length_282_cov_1.901288_g7756_i0 PRJNA839281 8025 282 1.901288 5.36163216 Pseudomonadati 3379134 Bacteria Bacteria 134 5.079999999999998e-35   NR NUQ35036.1 2026779 g7756 i0 78.3 12.3617021276596 83 18 88.3 0 282 34 399 481 NUQ35036.1 adenosylhomocysteinase [Planctomycetaceae bacterium] diamond 3486 135 0.992592592592593 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
30063033 30063033 PRJNA839281_S_NODE_33431_length_163_cov_0.894737_g33162_i0 PRJNA839281 33431 163 0.894737 1.45842131 Planctomycetia 203683 Bacteria Bacteria 77.4 3.1e-15   NR TVS19381.1 2026779 g33162 i0 57.4 6.95705521472393 54 23 99.4 0 163 2 83 136 TVS19381.1 MAG: dihydroorotate dehydrogenase electron transfer subunit [Planctomycetaceae bacterium] diamond 1134 77.8 0.994858611825193 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
30528546 30528546 PRJNA839281_S_NODE_16333_length_202_cov_0.993464_g16064_i0 PRJNA839281 16333 202 0.993464 2.00679728 Phycisphaerae bacterium 2026778 Bacteria Bacteria 45.4 0.00243   NR MBW7905979.1 2026778 g16064 i0 39.6 1.42574257425743 48 29 71.3 0 199 56 83 130 MBW7905979.1 alpha/beta fold hydrolase [Phycisphaerae bacterium] diamond 288 45.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium
31413548 31413548 PRJNA839281_S_NODE_9456_length_258_cov_1.655502_g9187_i0 PRJNA839281 9456 258 1.655502 4.27119516 Phycisphaerales bacterium 2052180 Bacteria Bacteria 130 1.8899999999999998e-34   NR MBK7404499.1 2052180 g9187 i0 67.1 2.95348837209302 85 28 98.8 0 257 3 35 119 MBK7404499.1 NAD(P)-dependent alcohol dehydrogenase [Phycisphaerales bacterium] diamond 762 130 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
32552728 32552728 PRJNA839281_S_NODE_26319_length_167_cov_1.296610_g26050_i0 PRJNA839281 26319 167 1.29661 2.1653387 Singulisphaera sp. 1906241 Bacteria Bacteria 44.3 0.00378   NR MEJ7637766.1 1906241 g26050 i0 52.5 0.718562874251497 40 18 71.9 1 126 7 147 185 MEJ7637766.1 sigma factor [Singulisphaera sp.] diamond 120 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Singulisphaera Singulisphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;