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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA839281" and tax_phylum = "Deinococcota"

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tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA839281 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5058256 5058256 PRJNA839281_S_NODE_12624_length_225_cov_1.073864_g12355_i0 PRJNA839281 12624 225 1.073864 2.416194 Deinococcus reticulitermitis 856736 Bacteria Bacteria 136 8.23e-39   NR WP_092264396.1 856736 g12355 i0 93.1 0.96 72 5 96 0 8 223 1 72 WP_092264396.1 DUF4388 domain-containing protein [Deinococcus reticulitermitis] diamond 216 136 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
5932997 5932997 PRJNA839281_S_NODE_34465_length_163_cov_0.877193_g34196_i0 PRJNA839281 34465 163 0.877193 1.42982459 Deinococcus antarcticus 1298767 Bacteria Bacteria 99 1.32e-24   NR WP_380079676.1 1298767 g34196 i0 100 0.993865030674847 54 0 99.4 0 162 1 57 110 WP_380079676.1 OmpH family outer membrane protein [Deinococcus antarcticus] diamond 162 99 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus antarcticus
11434221 11434221 PRJNA839281_S_NODE_4889_length_407_cov_1.737430_g4620_i0 PRJNA839281 4889 407 1.73743 7.0713401 Thermus caliditerrae 1330700 Bacteria Bacteria 189 1.62e-58   NR WP_038045255.1 1330700 g4620 i0 92.9 0.722358722358722 98 7 72.2 0 407 114 79 176 WP_038045255.1 GTP-binding protein [Thermus caliditerrae] diamond 294 189 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus caliditerrae
26674499 26674499 PRJNA839281_S_NODE_36301_length_162_cov_0.858407_g36032_i0 PRJNA839281 36301 162 0.858407 1.39061934 Thermus oshimai 56957 Bacteria Bacteria 55.5 2.38e-8   NR GAA6741988.1 56957 g36032 i0 58.7 0.851851851851852 46 19 85.2 0 2 139 38 83 GAA6741988.1 hypothetical protein Thermus77359_21750 [Thermus oshimai] diamond 138 55.5 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus oshimai
27465638 27465638 PRJNA839281_S_NODE_29203_length_166_cov_0.871795_g28934_i0 PRJNA839281 29203 166 0.871795 1.4471797 Deinococcus reticulitermitis 856736 Bacteria Bacteria 76.3 2.03e-14   NR WP_143068344.1 856736 g28934 i0 83 0.849397590361446 47 8 84.9 0 162 22 277 323 WP_143068344.1 AfsR/SARP family transcriptional regulator [Deinococcus reticulitermitis] diamond 141 76.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
27465642 27465642 PRJNA839281_S_NODE_9623_length_256_cov_1.202899_g9354_i0 PRJNA839281 9623 256 1.202899 3.07942144 Thermus sp. LT1-2-5 3026935 Bacteria Bacteria 99.4 8.26e-24   NR WP_353513207.1 3026935 g9354 i0 62.4 0.99609375 85 32 99.6 0 255 1 34 118 WP_353513207.1 protoglobin domain-containing protein [Thermus sp. LT1-2-5] diamond 255 99.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. LT1-2-5
28065413 28065413 PRJNA839281_S_NODE_36865_length_161_cov_0.910714_g36596_i0 PRJNA839281 36865 161 0.910714 1.46624954 Deinococcus reticulitermitis 856736 Bacteria Bacteria 102 4.52e-24   NR WP_092265235.1 856736 g36596 i0 92.3 0.968944099378882 52 4 96.9 0 160 5 4 55 WP_092265235.1 glycogen synthase [Deinococcus reticulitermitis] diamond 156 102 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
28096955 28096955 PRJNA839281_S_NODE_33685_length_163_cov_0.894737_g33416_i0 PRJNA839281 33685 163 0.894737 1.45842131 Thermus aquaticus 271 Bacteria Bacteria 92.4 2.5399999999999994e-23   NR KOX88990.1 271 g33416 i0 100 2.70552147239264 49 0 90.2 0 163 17 3 51 KOX88990.1 hypothetical protein BVI061214_00133 [Thermus aquaticus] diamond 441 92.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
28421397 28421397 PRJNA839281_S_NODE_28826_length_166_cov_0.871795_g28557_i0 PRJNA839281 28826 166 0.871795 1.4471797 Deinococcus 1298 Bacteria Bacteria 81.3 3.36e-16   NR WP_103127746.1 200253 g28557 i0 77.8 3.90361445783133 54 12 97.6 0 3 164 526 579 WP_103127746.1 vWA domain-containing protein [Deinococcus aerius] diamond 648 81.3 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aerius
28475897 28475897 PRJNA839281_S_NODE_33086_length_163_cov_1.228070_g32817_i0 PRJNA839281 33086 163 1.22807 2.0017541 Deinococcus wulumuqiensis 980427 Bacteria Bacteria 65.1 1.51e-10   NR WP_278913702.1 980427 g32817 i0 55.8 0.957055214723926 52 23 95.7 0 6 161 90 141 WP_278913702.1 hypothetical protein [Deinococcus wulumuqiensis] diamond 156 65.1 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus wulumuqiensis
28705457 28705457 PRJNA839281_S_NODE_21947_length_179_cov_1.915385_g21678_i0 PRJNA839281 21947 179 1.915385 3.42853915 Thermus 270 Bacteria Bacteria 74.3 1.5e-14   NR WP_071678125.1 56956 g21678 i0 67.8 1.97765363128492 59 19 98.9 0 177 1 138 196 WP_071678125.1 protoglobin domain-containing protein [Thermus brockianus] diamond 354 74.3 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus brockianus
28791458 28791458 PRJNA839281_S_NODE_27527_length_167_cov_0.864407_g27258_i0 PRJNA839281 27527 167 0.864407 1.44355969 Deinococcus malanensis 1706855 Bacteria Bacteria 71.2 9.57e-13   NR WP_189004468.1 1706855 g27258 i0 72.2 2.91017964071856 54 15 97 0 162 1 72 125 WP_189004468.1 sensor histidine kinase [Deinococcus malanensis] diamond 486 71.2 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus malanensis
28822900 28822900 PRJNA839281_S_NODE_36088_length_162_cov_0.902655_g35819_i0 PRJNA839281 36088 162 0.902655 1.4623011 Deinococcus fonticola 2528713 Bacteria Bacteria 106 1.05e-26   NR WP_135230630.1 2528713 g35819 i0 98.1 0.981481481481482 53 1 98.1 0 3 161 80 132 WP_135230630.1 hypothetical protein [Deinococcus fonticola] diamond 159 106 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus fonticola
29044346 29044346 PRJNA839281_S_NODE_36008_length_162_cov_0.902655_g35739_i0 PRJNA839281 36008 162 0.902655 1.4623011 Deinococcus aetherius 200252 Bacteria Bacteria 68.9 2.12e-12   NR BDP42480.1 200252 g35739 i0 60.4 0.981481481481482 53 21 98.1 0 162 4 99 151 BDP42480.1 hypothetical protein DAETH_24490 [Deinococcus aetherius] diamond 159 68.9 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aetherius
29422855 29422855 PRJNA839281_S_NODE_28129_length_166_cov_0.871795_g27860_i0 PRJNA839281 28129 166 0.871795 1.4471797 Deinococcus sp. VB343 3385567 Bacteria Bacteria 45.1 0.00204   NR WP_414658003.1 3385567 g27860 i0 40.7 0.975903614457831 54 32 97.6 0 2 163 296 349 WP_414658003.1 hypothetical protein [Deinococcus sp. VB343] diamond 162 45.1 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. VB343
29517698 29517698 PRJNA839281_S_NODE_37290_length_161_cov_0.910714_g37021_i0 PRJNA839281 37290 161 0.910714 1.46624954 Deinococcus knuensis 1837380 Bacteria Bacteria 97.1 3.07e-22   NR WP_189100654.1 1837380 g37021 i0 98.1 0.987577639751553 53 1 98.8 0 2 160 61 113 WP_189100654.1 sensor domain-containing diguanylate cyclase [Deinococcus knuensis] diamond 159 97.1 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus knuensis
30023286 30023286 PRJNA839281_S_NODE_18391_length_192_cov_1.531469_g18122_i0 PRJNA839281 18391 192 1.531469 2.94042048 Thermus aquaticus 271 Bacteria Bacteria 126 6.129999999999999e-32   NR WP_082333148.1 271 g18122 i0 98.4 0.984375 63 1 98.4 0 191 3 216 278 WP_082333148.1 DNA primase [Thermus aquaticus] diamond 189 126 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
30276143 30276143 PRJNA839281_S_NODE_16232_length_202_cov_1.875817_g15963_i0 PRJNA839281 16232 202 1.875817 3.78915034 Thermus caliditerrae 1330700 Bacteria Bacteria 87 2.2e-19   NR WP_038045256.1 1330700 g15963 i0 58.6 2.07920792079208 70 26 99.5 1 2 202 78 147 WP_038045256.1 protoglobin domain-containing protein [Thermus caliditerrae] diamond 420 87 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus caliditerrae
30781356 30781356 PRJNA839281_S_NODE_11894_length_231_cov_1.296703_g11625_i0 PRJNA839281 11894 231 1.296703 2.99538393 Thermus sp. 275 Bacteria Bacteria 107 4.5e-25   NR WP_314134006.1 275 g11625 i0 83.9 0.727272727272727 56 9 72.7 0 3 170 269 324 WP_314134006.1 hypothetical protein [Thermus sp.] diamond 168 107 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp.
31191784 31191784 PRJNA839281_S_NODE_14755_length_210_cov_1.677019_g14486_i0 PRJNA839281 14755 210 1.677019 3.5217399 Thermus sp. 275 Bacteria Bacteria 140 9.77e-38   NR WP_314134006.1 275 g14486 i0 100 1 70 0 100 0 210 1 346 415 WP_314134006.1 hypothetical protein [Thermus sp.] diamond 210 140 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp.
31286859 31286859 PRJNA839281_S_NODE_35235_length_162_cov_0.902655_g34966_i0 PRJNA839281 35235 162 0.902655 1.4623011 Deinococcus sp. KNUC121 47478 Bacteria Bacteria 52.8 3.7e-6   NR WP_239052284.1 2917691 g34966 i0 48.1 1 54 28 100 0 162 1 97 150 WP_239052284.1 type II secretion system protein GspD [Deinococcus sp. KNUC1210] diamond 162 52.8 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. KNUC1210
31476946 31476946 PRJNA839281_S_NODE_31616_length_164_cov_0.886957_g31347_i0 PRJNA839281 31616 164 0.886957 1.45460948 Thermus aquaticus 271 Bacteria Bacteria 107 1.61e-28   NR WP_248841738.1 271 g31347 i0 100 0.98780487804878 54 0 98.8 0 163 2 9 62 WP_248841738.1 DUF86 domain-containing protein [Thermus aquaticus] diamond 162 107 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
31706663 31706663 PRJNA839281_S_NODE_28577_length_166_cov_0.871795_g28308_i0 PRJNA839281 28577 166 0.871795 1.4471797 Deinococcus 1298 Bacteria Bacteria 82 1.38e-17   NR MXV20827.1 1507289 g28308 i0 70.4 6.77710843373494 54 16 97.6 0 164 3 22 75 MXV20827.1 methyltransferase domain-containing protein [Deinococcus xianganensis] diamond 1125 82.8 0.990338164251208 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus xianganensis
32014508 32014508 PRJNA839281_S_NODE_23418_length_175_cov_1.214286_g23149_i0 PRJNA839281 23418 175 1.214286 2.1250005 Thermus sp. 275 Bacteria Bacteria 67.4 2.83e-11   NR MDM7325172.1 275 g23149 i0 58.3 2.05714285714286 60 23 99.4 2 174 1 118 177 MDM7325172.1 hypothetical protein [Thermus sp.] diamond 360 67.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp.
32204397 32204397 PRJNA839281_S_NODE_21438_length_181_cov_1.159091_g21169_i0 PRJNA839281 21438 181 1.159091 2.09795471 Thermus aquaticus 271 Bacteria Bacteria 105 5.4e-26   NR WP_082333091.1 271 g21169 i0 100 0.878453038674033 53 0 87.8 0 1 159 90 142 WP_082333091.1 DNA-processing protein DprA [Thermus aquaticus] diamond 159 105 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
32299649 32299649 PRJNA839281_S_NODE_15519_length_206_cov_0.974522_g15250_i0 PRJNA839281 15519 206 0.974522 2.00751532 Thermus 270 Bacteria Bacteria 105 2.7200000000000003e-26   NR WP_018461859.1 270 g15250 i0 75 0.990291262135922 68 17 99 0 206 3 99 166 WP_018461859.1 MULTISPECIES: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [Thermus] diamond 204 105 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;