RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA835051" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA835051 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29044300 29044300 PRJNA835051_S_NODE_47788_length_220_cov_1.158192_g47492_i0 PRJNA835051 47788 220 1.158192 2.5480224 Biomphalaria glabrata 6526 Mollusca Mollusca 42.4 0.00522   NR KAI8727607.1 6526 g47492 i0 51.7 0.395454545454545 29 14 39.5 0 198 112 41 69 KAI8727607.1 hypothetical protein BgiBS90_038149 [Biomphalaria glabrata] diamond 87 42.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
29044302 29044302 PRJNA835051_S_NODE_56548_length_208_cov_2.272727_g56252_i0 PRJNA835051 56548 208 2.272727 4.72727216 Acanthosepion pharaonis 158019 Mollusca Mollusca 43.1 0.0165   NR CAE1262564.1 158019 g56252 i0 65.6 0.879807692307692 61 16 80.8 2 179 12 243 303 CAE1262564.1 unnamed protein product [Acanthosepion pharaonis] diamond 183 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Sepiida Sepiidae Acanthosepion Acanthosepion pharaonis
30876097 30876097 PRJNA835051_S_NODE_14054_length_300_cov_2.937743_g13758_i0 PRJNA835051 14054 300 2.937743 8.813229 Dreissena polymorpha 45954 Mollusca Mollusca 44.3 0.0208   NR XP_052271258.1 45954 g13758 i0 34.4 0.61 61 39 61 1 292 110 160 219 XP_052271258.1 uncharacterized protein LOC127871976 isoform X1 [Dreissena polymorpha] diamond 183 44.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;