RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA835051" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA835051 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29075891 29075891 PRJNA835051_S_NODE_50028_length_217_cov_1.086207_g49732_i0 PRJNA835051 50028 217 1.086207 2.35706919 Abalone asfa-like virus 2839893 Viruses Viruses 45.8 0.00205   NR BCY04678.1 2839893 g49732 i0 33.3 0.663594470046083 48 32 66.4 0 64 207 97 144 BCY04678.1 hypothetical protein [Abalone asfa-like virus] diamond 144 45.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Asfuvirales Asfarviridae   Abalone asfa-like virus
29675273 29675273 PRJNA835051_S_NODE_28990_length_252_cov_2.258373_g28694_i0 PRJNA835051 28990 252 2.258373 5.69109996 Mytilus Mediterranean mussel adintovirus 2609860 Viruses Viruses 48.1 5.47e-4   NR DAC81352.1 2609860 g28694 i0 47.7 0.523809523809524 44 16 44 1 126 16 421 464 DAC81352.1 TPA_asm: PolB [Mytilus Mediterranean mussel adintovirus] diamond 132 48.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Mytilus Mediterranean mussel adintovirus
32898642 32898642 PRJNA835051_S_NODE_65360_length_198_cov_8.470968_g65064_i0 PRJNA835051 65360 198 8.470968 16.77251664 Pimephales minnow adintovirus 2609864 Viruses Viruses 67.4 1.52e-11   NR DAC81394.1 2609864 g65064 i0 62.5 0.727272727272727 48 18 72.7 0 55 198 7 54 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 144 67.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;