RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA833575" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA833575 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29706756 29706756 PRJNA833575_P_NODE_42870_length_230_cov_0.894410_g42733_i0 PRJNA833575 42870 230 0.89441 2.057143 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 43.9 0.00437   NR MEY2641289.1 2762014 g42733 i0 32.9 1.0304347826087 79 42 99.1 5 3 230 19 89 MEY2641289.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 237 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30812867 30812867 PRJNA833575_P_NODE_34574_length_251_cov_1.203297_g34437_i0 PRJNA833575 34574 251 1.203297 3.02027547 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 112 1.22e-26   NR RMD63071.1 2762014 g34437 i0 58.5 0.9800796812749 82 34 98 0 3 248 340 421 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 246 112 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;