RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA833575" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA833575 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29959800 29959800 PRJNA833575_P_NODE_46571_length_226_cov_0.917197_g46434_i0 PRJNA833575 46571 226 0.917197 2.07286522 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0278   NR MFH1460404.1 2035772 g46434 i0 43.4 0.70353982300885 53 29 69 1 207 52 190 242 MFH1460404.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 159 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30497063 30497063 PRJNA833575_P_NODE_32033_length_262_cov_1.575130_g31896_i0 PRJNA833575 32033 262 1.57513 4.1268406 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.4 1.08e-5   NR MDB4349658.1 2035772 g31896 i0 35.6 0.99618320610687 87 52 95 2 252 4 101 187 MDB4349658.1 glutathione S-transferase [Candidatus Omnitrophota bacterium] diamond 261 52.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;