contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA833575" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19950924 | 19950924 | PRJNA833575_P_NODE_40196_length_233_cov_0.878049_g40059_i0 | PRJNA833575 | 40196 | 233 | 0.878049 | 2.04585417 | root | 1 | Root_unresolved | Root_unresolved | 105 | 6.020000000000001e-27 | NR | WP_006636326.1 | 1386 | g40059 | i0 | 66.7 | 8.98712446351931 | 69 | 23 | 88.8 | 0 | 214 | 8 | 3 | 71 | WP_006636326.1 MULTISPECIES: glutathione peroxidase [Bacillus] | diamond | 2094 | 105 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | |||
| 27600444 | 27600444 | PRJNA833575_P_NODE_33624_length_255_cov_1.317204_g33487_i0 | PRJNA833575 | 33624 | 255 | 1.317204 | 3.3588702 | Bacillati | 1783272 | Bacteria | Bacteria | 57.4 | 1.29e-8 | NR | MBO5985740.1 | 1898203 | g33487 | i0 | 54 | 1.70588235294118 | 50 | 20 | 56.5 | 2 | 255 | 112 | 24 | 72 | MBO5985740.1 DUF4215 domain-containing protein [Lachnospiraceae bacterium] | diamond | 435 | 57.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 28263120 | 28263120 | PRJNA833575_P_NODE_45946_length_227_cov_0.911392_g45809_i0 | PRJNA833575 | 45946 | 227 | 0.911392 | 2.06885984 | Bacteria | 2 | Bacteria | Bacteria | 70.5 | 5.09e-12 | NR | MBP3232660.1 | 1872532 | g45809 | i0 | 50.7 | 11.920704845815 | 69 | 33 | 89.9 | 1 | 207 | 4 | 649 | 717 | MBP3232660.1 FIST C-terminal domain-containing protein [Anaerovibrio sp.] | diamond | 2706 | 71.2 | 0.990168539325843 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Selenomonadaceae | Anaerovibrio | Anaerovibrio sp. | ||
| 28412723 | 28412723 | PRJNA833575_P_NODE_37626_length_237_cov_1.714286_g37489_i0 | PRJNA833575 | 37626 | 237 | 1.714286 | 4.06285782 | Clostridiaceae bacterium | 1898204 | Bacteria | Bacteria | 141 | 4.569999999999999e-37 | NR | NBH77902.1 | 1898204 | g37489 | i0 | 86.1 | 1 | 79 | 11 | 100 | 0 | 237 | 1 | 574 | 652 | NBH77902.1 alpha-galactosidase [Clostridiaceae bacterium] | diamond | 237 | 141 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridiaceae bacterium | |||
| 29422781 | 29422781 | PRJNA833575_P_NODE_15009_length_378_cov_0.957929_g14872_i0 | PRJNA833575 | 15009 | 378 | 0.957929 | 3.62097162 | Syntrophomonadaceae bacterium | 2093811 | Bacteria | Bacteria | 167 | 8.77e-49 | NR | NLB89001.1 | 2093811 | g14872 | i0 | 68 | 2.97619047619048 | 125 | 40 | 99.2 | 0 | 3 | 377 | 5 | 129 | NLB89001.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Syntrophomonadaceae bacterium] | diamond | 1125 | 167 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Syntrophomonadaceae | Syntrophomonadaceae bacterium | |||
| 29928426 | 29928426 | PRJNA833575_P_NODE_13211_length_401_cov_0.846386_g13074_i0 | PRJNA833575 | 13211 | 401 | 0.846386 | 3.39400786 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 49.3 | 0.00112 | NR | MEE3344554.1 | 1903720 | g13074 | i0 | 48 | 0.374064837905237 | 50 | 26 | 37.4 | 0 | 62 | 211 | 248 | 297 | MEE3344554.1 filamin/ABP280 repeat domain-containing protein [Bacilli bacterium] | diamond | 150 | 49.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 30758298 | 30758298 | PRJNA833575_P_NODE_40334_length_233_cov_0.878049_g40197_i0 | PRJNA833575 | 40334 | 233 | 0.878049 | 2.04585417 | Blautia | 572511 | Bacteria | Bacteria | 128 | 2.3e-34 | NR | WP_033140526.1 | 765821 | g40197 | i0 | 80 | 1.931330472103 | 75 | 15 | 96.6 | 0 | 9 | 233 | 50 | 124 | WP_033140526.1 fructose bisphosphate aldolase [uncultured Blautia sp.] | diamond | 450 | 128 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Blautia | uncultured Blautia sp. | ||
| 31824468 | 31824468 | PRJNA833575_P_NODE_29437_length_274_cov_1.404878_g29300_i0 | PRJNA833575 | 29437 | 274 | 1.404878 | 3.84936572 | Virgibacillus proomii | 84407 | Bacteria | Bacteria | 56.2 | 9.29e-7 | NR | WP_245799798.1 | 84407 | g29300 | i0 | 50.8 | 2.01459854014599 | 61 | 29 | 66.8 | 1 | 263 | 81 | 486 | 545 | WP_245799798.1 M4 family metallopeptidase [Virgibacillus proomii] | diamond | 552 | 56.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Virgibacillus | Virgibacillus proomii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;