RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA833575" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA833575 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31413482 31413482 PRJNA833575_P_NODE_14556_length_383_cov_1.203822_g14419_i0 PRJNA833575 14556 383 1.203822 4.61063826 Edafosvirus sp. 2487765 Viruses Viruses 70.5 1.81e-11   NR AYV78946.1 2487765 g14419 i0 30.3 0.955613577023499 122 79 94 2 21 380 45 162 AYV78946.1 MAG: hypothetical protein Edafosvirus56_2 [Edafosvirus sp.] diamond 366 70.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.
31919567 31919567 PRJNA833575_P_NODE_44097_length_229_cov_0.900000_g43960_i0 PRJNA833575 44097 229 0.9 2.061 Tupanvirus soda lake 2126985 Viruses Viruses 61.2 9.32e-9   NR YP_010781610.1 2126985 g43960 i0 42.7 0.982532751091703 75 31 98.3 2 5 229 428 490 YP_010781610.1 hypothetical protein QJ857_gp1097 [Tupanvirus soda lake] diamond 225 61.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
32867211 32867211 PRJNA833575_P_NODE_40500_length_233_cov_0.878049_g40363_i0 PRJNA833575 40500 233 0.878049 2.04585417 Tupanvirus soda lake 2126985 Viruses Viruses 78.2 6.84e-15   NR YP_010782487.1 2126985 g40363 i0 48.1 1.96995708154506 77 39 97.9 1 5 232 218 294 YP_010782487.1 phosphoribosyl transferase domain protein [Tupanvirus soda lake] diamond 459 78.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;