contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA827593" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23773364 | 23773364 | PRJNA827593_P_NODE_22739_length_442_cov_3.287263_g22440_i0 | PRJNA827593 | 22739 | 442 | 3.287263 | 14.52970246 | root | 1 | Root_unresolved | Root_unresolved | 77 | 3.51e-13 | NR | KAK7796718.1 | 447135 | g22440 | i0 | 48.1 | 1.67647058823529 | 79 | 41 | 53.6 | 0 | 142 | 378 | 492 | 570 | KAK7796718.1 hypothetical protein U0070_023578 [Myodes glareolus] | diamond | 741 | 77 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Cricetidae | Myodes | Myodes glareolus | |
| 27086230 | 27086230 | PRJNA827593_P_NODE_52882_length_273_cov_3.555000_g52583_i0 | PRJNA827593 | 52882 | 273 | 3.555 | 9.70515 | Meriones unguiculatus | 10047 | Chordata | Chordata | 43.5 | 0.0272 | NR | XP_060237778.1 | 10047 | g52583 | i0 | 44.4 | 0.494505494505495 | 45 | 25 | 49.5 | 0 | 81 | 215 | 360 | 404 | XP_060237778.1 centrosomal protein of 44 kDa isoform X2 [Meriones unguiculatus] | diamond | 135 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Meriones | Meriones unguiculatus | |
| 27370925 | 27370925 | PRJNA827593_P_NODE_64743_length_245_cov_2.523256_g64444_i0 | PRJNA827593 | 64743 | 245 | 2.523256 | 6.1819772 | Engystomops pustulosus | 76066 | Chordata | Chordata | 57.4 | 2.69e-7 | NR | KAG8568304.1 | 76066 | g64444 | i0 | 36.1 | 1.01632653061224 | 83 | 48 | 99.2 | 2 | 243 | 1 | 248 | 327 | KAG8568304.1 hypothetical protein GDO81_013953 [Engystomops pustulosus] | diamond | 249 | 57.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Leptodactylidae | Engystomops | Engystomops pustulosus | |
| 28231445 | 28231445 | PRJNA827593_P_NODE_65166_length_245_cov_0.895349_g64867_i0 | PRJNA827593 | 65166 | 245 | 0.895349 | 2.19360505 | root | 1 | Root_unresolved | Root_unresolved | 58.2 | 1.42e-7 | NR | XP_006217958.1 | 30538 | g64867 | i0 | 50 | 6.64897959183673 | 46 | 23 | 56.3 | 0 | 24 | 161 | 350 | 395 | XP_006217958.1 beta-mannosidase isoform X1 [Vicugna pacos] | diamond | 1629 | 58.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Camelidae | Vicugna | Vicugna pacos | |
| 28831521 | 28831521 | PRJNA827593_P_NODE_47828_length_290_cov_1.930876_g47529_i0 | PRJNA827593 | 47828 | 290 | 1.930876 | 5.5995404 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 66.6 | 1.64e-10 | NR | NXH44011.1 | 667154 | g47529 | i0 | 56.6 | 5.21379310344828 | 53 | 23 | 54.8 | 0 | 81 | 239 | 239 | 291 | NXH44011.1 ACTG protein [Dicaeum eximium] | diamond | 1512 | 67 | 0.994029850746269 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Dicaeidae | Dicaeum | Dicaeum eximium | |
| 28886052 | 28886052 | PRJNA827593_P_NODE_54548_length_269_cov_1.178571_g54249_i0 | PRJNA827593 | 54548 | 269 | 1.178571 | 3.17035599 | Protopterus annectens | 7888 | Chordata | Chordata | 45.4 | 0.00598 | NR | XP_043914766.1 | 7888 | g54249 | i0 | 39.7 | 0.646840148698885 | 58 | 31 | 64.7 | 1 | 245 | 72 | 1561 | 1614 | XP_043914766.1 trichohyalin-like isoform X1 [Protopterus annectens] | diamond | 174 | 45.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Ceratodontiformes | Protopteridae | Protopterus | Protopterus annectens | ||
| 29454152 | 29454152 | PRJNA827593_P_NODE_66990_length_242_cov_1.804734_g66691_i0 | PRJNA827593 | 66990 | 242 | 1.804734 | 4.36745628 | Hypanus sabinus | 79690 | Chordata | Chordata | 48.1 | 4.54e-4 | NR | XP_059816063.1 | 79690 | g66691 | i0 | 39.4 | 1.63636363636364 | 66 | 35 | 75.6 | 1 | 36 | 218 | 139 | 204 | XP_059816063.1 uncharacterized protein LOC132387718 [Hypanus sabinus] | diamond | 396 | 48.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Myliobatiformes | Dasyatidae | Hypanus | Hypanus sabinus | |
| 31896358 | 31896358 | PRJNA827593_P_NODE_55577_length_266_cov_1.295337_g55278_i0 | PRJNA827593 | 55577 | 266 | 1.295337 | 3.44559642 | Mammalia | 40674 | Chordata | Chordata | 70.5 | 8.66e-12 | NR | XP_071072823.1 | 9361 | g55278 | i0 | 60 | 53.9097744360902 | 70 | 25 | 76.7 | 2 | 244 | 41 | 1048 | 1116 | XP_071072823.1 lysine-specific demethylase 4C isoform X1 [Dasypus novemcinctus] | diamond | 14340 | 70.9 | 0.994358251057828 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Cingulata | Dasypodidae | Dasypus | Dasypus novemcinctus | |
| 32772591 | 32772591 | PRJNA827593_P_NODE_24520_length_424_cov_2.119658_g24221_i0 | PRJNA827593 | 24520 | 424 | 2.119658 | 8.98734992 | Hemiscyllium ocellatum | 170820 | Chordata | Chordata | 48.9 | 0.00163 | NR | XP_060679184.1 | 170820 | g24221 | i0 | 30.1 | 2.93632075471698 | 93 | 64 | 65.8 | 1 | 10 | 288 | 15 | 106 | XP_060679184.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like, partial [Hemiscyllium ocellatum] | diamond | 1245 | 48.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Orectolobiformes | Hemiscylliidae | Hemiscyllium | Hemiscyllium ocellatum | |
| 32907177 | 32907177 | PRJNA827593_P_NODE_68940_length_234_cov_2.391304_g68641_i0 | PRJNA827593 | 68940 | 234 | 2.391304 | 5.59565136 | Squamata | 8509 | Chordata | Chordata | 50.8 | 4.7e-5 | NR | ETE61196.1 | 8665 | g68641 | i0 | 60.5 | 6.06410256410256 | 43 | 17 | 55.1 | 0 | 23 | 151 | 24 | 66 | ETE61196.1 putative phospholipid-transporting ATPase ID, partial [Ophiophagus hannah] | diamond | 1419 | 51.2 | 0.9921875 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Elapidae | Ophiophagus | Ophiophagus hannah |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;