contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA827593" and tax_phylum = "Bacillariophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 821318 | 821318 | PRJNA827593_P_NODE_41721_length_313_cov_2.533333_g41422_i0 | PRJNA827593 | 41721 | 313 | 2.533333 | 7.92933229 | Nitzschia | 2857 | SAR_Eukaryotes | SAR_Eukaryotes | 116 | 9.5e-28 | NR | KAG7366701.1 | 303405 | g41422 | i0 | 58.3 | 4.53354632587859 | 96 | 39 | 92 | 1 | 290 | 3 | 878 | 972 | KAG7366701.1 2-oxoglutarate dehydrogenase E1 component [Nitzschia inconspicua] | diamond | 1419 | 117 | 0.991452991452991 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Nitzschia | Nitzschia inconspicua | ||
| 4649780 | 4649780 | PRJNA827593_P_NODE_50384_length_282_cov_1.110048_g50085_i0 | PRJNA827593 | 50384 | 282 | 1.110048 | 3.13033536 | root | 1 | Root_unresolved | Root_unresolved | 157 | 1.84e-42 | NR | XP_002289187.1 | 296543 | g50085 | i0 | 76.3 | 10.9255319148936 | 93 | 22 | 98.9 | 0 | 3 | 281 | 512 | 604 | XP_002289187.1 ribonucleotide reductase large chain subunit [Thalassiosira pseudonana CCMP1335] | diamond | 3081 | 158 | 0.993670886075949 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira pseudonana | ||
| 27939038 | 27939038 | PRJNA827593_P_NODE_33865_length_353_cov_1.100000_g33566_i0 | PRJNA827593 | 33865 | 353 | 1.1 | 3.883 | Guinardia delicatula | 1244696 | SAR_Eukaryotes | SAR_Eukaryotes | 62 | 1.73e-9 | NR | QYC61920.1 | 216802 | g33566 | i0 | 55.6 | 0.88385269121813 | 54 | 20 | 42.5 | 1 | 151 | 2 | 8 | 61 | QYC61920.1 ribosomal protein L14 [Guinardia delicatula] | diamond | 312 | 62 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Rhizosoleniales | Rhizosoleniaceae | Guinardia | Guinardia delicatula | ||
| 28002269 | 28002269 | PRJNA827593_P_NODE_45905_length_297_cov_1.892857_g45606_i0 | PRJNA827593 | 45905 | 297 | 1.892857 | 5.62178529 | Nitzschia inconspicua | 303405 | SAR_Eukaryotes | SAR_Eukaryotes | 53.5 | 5.94e-6 | NR | KAG7344765.1 | 303405 | g45606 | i0 | 40.7 | 4.13131313131313 | 81 | 41 | 76.8 | 3 | 49 | 276 | 71 | 149 | KAG7344765.1 hypothetical protein IV203_032296 [Nitzschia inconspicua] | diamond | 1227 | 53.5 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Nitzschia | Nitzschia inconspicua |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;