RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA826497" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA826497 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11024351 11024351 PRJNA826497_S_NODE_16989_length_159_cov_1.738095_g16949_i0 PRJNA826497 16989 159 1.738095 2.76357105 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79 1.27e-15   NR XP_004343021.1 1257118 g16949 i0 72.3 6.09433962264151 47 13 88.7 0 158 18 302 348 XP_004343021.1 cathepsin L, putative [Acanthamoeba castellanii str. Neff] diamond 969 79 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31729518 31729518 PRJNA826497_S_NODE_13437_length_171_cov_3.500000_g13397_i0 PRJNA826497 13437 171 3.5 5.985 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 0.00114   NR XP_004348495.1 1257118 g13397 i0 95.2 0.368421052631579 21 1 36.8 0 2 64 775 795 XP_004348495.1 PH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 63 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;