RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA826497" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA826497 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27600426 27600426 PRJNA826497_S_NODE_6924_length_208_cov_3.742857_g6884_i0 PRJNA826497 6924 208 3.742857 7.78514256 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.9 5.36e-16   NR XP_031572272.1 6105 g6884 i0 53.6 4.05288461538461 56 26 80.8 0 1 168 299 354 XP_031572272.1 cathepsin O-like [Actinia tenebrosa] diamond 843 80.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
28642329 28642329 PRJNA826497_S_NODE_9407_length_191_cov_1.386076_g9367_i0 PRJNA826497 9407 191 1.386076 2.64740516 Opisthokonta 33154 Cnidaria other_Eukaryota 47.4 4.39e-4   NR XP_066927368.1 252671 g9367 i0 73.1 1.22513089005236 26 7 40.8 0 112 189 660 685 XP_066927368.1 phosphatidate phosphatase LPIN3-like [Clytia hemisphaerica] diamond 234 47.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
31042942 31042942 PRJNA826497_S_NODE_10055_length_187_cov_2.318182_g10015_i0 PRJNA826497 10055 187 2.318182 4.33500034 Siphonophorae 42759 Cnidaria other_Eukaryota 61.2 2.96e-9   NR YP_010890027.1 1390100 g10015 i0 49.1 7.9572192513369 57 29 91.4 0 171 1 61 117 YP_010890027.1 cytochrome c oxidase subunit II [Apolemia rubriversa] diamond 1488 61.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Siphonophorae Apolemiidae Apolemia Apolemia rubriversa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;