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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA825466" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA825466 · 22 ✖

analysis 1

  • diamond · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2096017 2096017 PRJNA825466_P_NODE_9482_length_292_cov_1.611872_g9381_i0 PRJNA825466 9482 292 1.611872 4.70666624 Flavobacteriales bacterium 2021391 Bacteria Bacteria 183 2.62e-53   NR MCB9163034.1 2021391 g9381 i0 89.6 0.986301369863014 96 10 98.6 0 289 2 98 193 MCB9163034.1 aldehyde dehydrogenase [Flavobacteriales bacterium] diamond 288 183 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium
5923706 5923706 PRJNA825466_P_NODE_925_length_705_cov_1.648734_g834_i0 PRJNA825466 925 705 1.648734 11.6235747 root 1 Root_unresolved Root_unresolved 199 3.089999999999999e-55   NR MCA6491779.1 1869212 g834 i0 67.6 1.19148936170213 136 44 57.9 0 701 294 631 766 MCA6491779.1 GTP-binding protein [Chitinophagaceae bacterium] diamond 840 201 0.990049751243781 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
9748472 9748472 PRJNA825466_P_NODE_28548_length_241_cov_0.916667_g28447_i0 PRJNA825466 28548 241 0.916667 2.20916747 unclassified Flavobacterium 196869 Bacteria Bacteria 159 3.34e-47   NR WP_153207106.1 196869 g28447 i0 94.9 0.983402489626556 79 4 98.3 0 239 3 87 165 WP_153207106.1 MULTISPECIES: GldM family protein [unclassified Flavobacterium] diamond 237 159 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
21222531 21222531 PRJNA825466_S_NODE_1457_length_250_cov_0.870056_g1451_i0 PRJNA825466 1457 250 0.870056 2.17514 Chitinophagaceae 563835 Bacteria Bacteria 110 2.5e-26   NR WP_090661288.1 1465490 g1451 i0 88.7 15.528 53 6 63.6 0 248 90 448 500 WP_090661288.1 S26 family signal peptidase [Parafilimonas terrae] diamond 3882 111 0.990990990990991 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Parafilimonas Parafilimonas terrae
26927904 26927904 PRJNA825466_P_NODE_28242_length_241_cov_0.916667_g28141_i0 PRJNA825466 28242 241 0.916667 2.20916747 Draconibacterium sp. 1965318 Bacteria Bacteria 88.6 1.73e-19   NR HPF51747.1 1965318 g28141 i0 50 0.995850622406639 80 40 99.6 0 240 1 130 209 HPF51747.1 CAP domain-containing protein [Draconibacterium sp.] diamond 240 88.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Prolixibacteraceae Draconibacterium Draconibacterium sp.
27244102 27244102 PRJNA825466_P_NODE_19623_length_248_cov_1.760000_g19522_i0 PRJNA825466 19623 248 1.76 4.3648 Bacteroidia bacterium 2044936 Bacteria Bacteria 143 1.97e-37   NR HXB41044.1 2044936 g19522 i0 78 0.991935483870968 82 18 99.2 0 2 247 74 155 HXB41044.1 PKD domain-containing protein [Bacteroidia bacterium] diamond 246 143 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia       Bacteroidia bacterium
28065175 28065175 PRJNA825466_S_NODE_1685_length_246_cov_0.890173_g1679_i0 PRJNA825466 1685 246 0.890173 2.18982558 Flavitalea sp. 1909289 Bacteria Bacteria 149 9.19e-40   NR HSB93653.1 1909289 g1679 i0 79 0.98780487804878 81 17 98.8 0 245 3 542 622 HSB93653.1 glycoside hydrolase family 3 N-terminal domain-containing protein [Flavitalea sp.] diamond 243 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavitalea Flavitalea sp.
28285980 28285980 PRJNA825466_S_NODE_1426_length_250_cov_1.209040_g1420_i0 PRJNA825466 1426 250 1.20904 3.0226 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 60.5 1.75e-8   NR HEY6504147.1 1869212 g1420 i0 67.6 1.884 34 11 40.8 0 1 102 247 280 HEY6504147.1 alpha/beta hydrolase-fold protein [Chitinophagaceae bacterium] diamond 471 60.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
28444210 28444210 PRJNA825466_S_NODE_1566_length_248_cov_1.217143_g1560_i0 PRJNA825466 1566 248 1.217143 3.01851464 Hymenobacter sp. IS2118 1505605 Bacteria Bacteria 112 1.34e-26   NR WP_035564435.1 1505605 g1560 i0 66.7 3.93145161290323 81 27 98 0 1 243 76 156 WP_035564435.1 sensor histidine kinase [Hymenobacter sp. IS2118] diamond 975 112 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter sp. IS2118
28475670 28475670 PRJNA825466_P_NODE_9766_length_290_cov_1.377880_g9665_i0 PRJNA825466 9766 290 1.37788 3.995852 Pedobacter cryoconitis 188932 Bacteria Bacteria 117 4.4e-31   NR WP_183878434.1 188932 g9665 i0 100 0.662068965517241 64 0 66.2 0 3 194 35 98 WP_183878434.1 hypothetical protein [Pedobacter cryoconitis] diamond 192 117 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter cryoconitis
28958121 28958121 PRJNA825466_P_NODE_27528_length_242_cov_0.911243_g27427_i0 PRJNA825466 27528 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 163 2.46e-50   NR WP_141554293.1 361581 g27427 i0 100 1.98347107438017 80 0 99.2 0 241 2 23 102 WP_141554293.1 redoxin domain-containing protein, partial [Tenacibaculum discolor] diamond 480 163 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Tenacibaculum Tenacibaculum discolor
29170405 29170405 PRJNA825466_P_NODE_18669_length_249_cov_0.875000_g18568_i0 PRJNA825466 18669 249 0.875 2.17875 Saprospiraceae bacterium 2202734 Bacteria Bacteria 44.3 0.0121   NR MDZ4707736.1 2202734 g18568 i0 39.3 0.674698795180723 56 31 67.5 1 82 249 1492 1544 MDZ4707736.1 CARDB domain-containing protein [Saprospiraceae bacterium] diamond 168 44.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
29580408 29580408 PRJNA825466_P_NODE_10970_length_281_cov_1.625000_g10869_i0 PRJNA825466 10970 281 1.625 4.56625 Cytophagales bacterium 2053541 Bacteria Bacteria 87.8 1.54e-19   NR MCR9066919.1 2053541 g10869 i0 57.9 0.811387900355872 76 31 81.1 1 279 52 87 161 MCR9066919.1 Hsp20/alpha crystallin family protein [Cytophagales bacterium] diamond 228 87.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales     Cytophagales bacterium
29936819 29936819 PRJNA825466_P_NODE_15911_length_253_cov_1.005556_g15810_i0 PRJNA825466 15911 253 1.005556 2.54405668 Paludibacter 346096 Bacteria Bacteria 50.4 8.46e-5   NR MDD4992995.1 1898105 g15810 i0 42 4.87351778656126 81 43 92.5 2 240 7 1264 1343 MDD4992995.1 alpha-2-macroglobulin family protein [Paludibacter sp.] diamond 1233 50.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae Paludibacter Paludibacter sp.
30212273 30212273 PRJNA825466_P_NODE_10732_length_283_cov_1.242857_g10631_i0 PRJNA825466 10732 283 1.242857 3.51728531 Sphingobacteriales bacterium 2044944 Bacteria Bacteria 129 1.03e-36   NR RYE50665.1 2044944 g10631 i0 83.1 0.816254416961131 77 13 81.6 0 47 277 1 77 RYE50665.1 MAG: hypothetical protein EOP48_19390 [Sphingobacteriales bacterium] diamond 231 129 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
30749567 30749567 PRJNA825466_P_NODE_22754_length_246_cov_0.890173_g22653_i0 PRJNA825466 22754 246 0.890173 2.18982558 Bacteroidota bacterium 1898104 Bacteria Bacteria 149 5.569999999999999e-42   NR MEN9549681.1 1898104 g22653 i0 90.2 2 82 8 100 0 246 1 244 325 MEN9549681.1 3-phosphoshikimate 1-carboxyvinyltransferase [Bacteroidota bacterium] diamond 492 149 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
31034223 31034223 PRJNA825466_P_NODE_26695_length_243_cov_0.905882_g26594_i0 PRJNA825466 26695 243 0.905882 2.20129326 Chryseobacterium sp. 1871047 Bacteria Bacteria 75.5 3.49e-14   NR MBO6201510.1 1871047 g26594 i0 90.9 1.08641975308642 44 4 54.3 0 110 241 1 44 MBO6201510.1 glycoside hydrolase family 28 protein [Chryseobacterium sp.] diamond 264 75.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp.
31159908 31159908 PRJNA825466_S_NODE_1395_length_251_cov_0.865169_g1389_i0 PRJNA825466 1395 251 0.865169 2.17157419 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 171 5.73e-48   NR MBL7846519.1 2099675 g1389 i0 97.6 2.97609561752988 83 2 99.2 0 3 251 480 562 MBL7846519.1 phosphoglycerate dehydrogenase [Cyclobacteriaceae bacterium] diamond 747 171 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
31517036 31517036 PRJNA825466_S_NODE_556_length_339_cov_1.654135_g550_i0 PRJNA825466 556 339 1.654135 5.60751765 FCB group 1783270 Bacteria Bacteria 75.5 8.85e-15   NR WP_050229787.1 821 g550 i0 100 0.955752212389381 36 0 31.9 0 193 300 1 36 WP_050229787.1 hypothetical protein [Phocaeicola vulgatus] diamond 324 75.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus
32014290 32014290 PRJNA825466_S_NODE_1398_length_251_cov_0.865169_g1392_i0 PRJNA825466 1398 251 0.865169 2.17157419 Ohtaekwangia kribbensis 688913 Bacteria Bacteria 128 8.269999999999998e-35   NR WP_377579525.1 688913 g1392 i0 62.7 1.9601593625498 83 31 99.2 0 2 250 128 210 WP_377579525.1 DUF6048 family protein [Ohtaekwangia kribbensis] diamond 492 128 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Fulvivirgaceae Ohtaekwangia Ohtaekwangia kribbensis
32655020 32655020 PRJNA825466_P_NODE_17980_length_250_cov_0.870056_g17879_i0 PRJNA825466 17980 250 0.870056 2.17514 Ferruginibacter 1004303 Bacteria Bacteria 147 4.34e-39   NR MBK8610442.1 1869212 g17879 i0 84.3 5.976 83 13 99.6 0 250 2 103 185 MBK8610442.1 DUF4954 family protein [Chitinophagaceae bacterium] diamond 1494 147 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
32709614 32709614 PRJNA825466_S_NODE_1440_length_250_cov_0.870056_g1434_i0 PRJNA825466 1440 250 0.870056 2.17514 Ferruginibacter sp. 1940288 Bacteria Bacteria 125 8.58e-33   NR MEO6229582.1 1940288 g1434 i0 72.7 0.924 77 21 92.4 0 15 245 181 257 MEO6229582.1 hypothetical protein [Ferruginibacter sp.] diamond 231 125 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ferruginibacter Ferruginibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;