RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA816527" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA816527 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9747515 9747515 PRJNA816527_P_NODE_18808_length_246_cov_0.890173_g18758_i0 PRJNA816527 18808 246 0.890173 2.18982558 Metazoa 33208 Annelida Annelida 96.3 2.23e-22   NR ACR00066.1 644278 g18758 i0 60 21.0853658536585 75 29 91.5 1 226 2 105 178 ACR00066.1 cytochrome c oxidase subunit II [Paralvinella sulfincola] diamond 5187 96.7 0.995863495346432 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella sulfincola
30307738 30307738 PRJNA816527_P_NODE_15912_length_260_cov_1.647059_g15862_i0 PRJNA816527 15912 260 1.647059 4.2823534 Phragmatopoma lapidosa 341668 Annelida Annelida 99.4 3.4099999999999995e-23   NR AKV16218.1 341668 g15862 i0 55.8 0.992307692307692 86 37 98.1 1 258 4 153 238 AKV16218.1 putative trypsin-like serine protease [Phragmatopoma lapidosa] diamond 258 99.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Sabellariidae Phragmatopoma Phragmatopoma lapidosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;