RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA816047" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA816047 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33044532 33044532 PRJNA816047b_S_NODE_39580_length_271_cov_1.712121_g37268_i0 PRJNA816047 39580 271 1.712121 4.63984791 root 1 Root_unresolved Root_unresolved 48.5 1.36e-4   NR HET8689268.1 2213 g37268 i0 40.4 2.2140221402214 47 26 52 1 230 90 93 137 HET8689268.1 DUF2591 domain-containing protein [Methanosarcina sp.] diamond 600 48.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
33127080 33127080 PRJNA816047d_S_NODE_77479_length_264_cov_3.383886_g75644_i0 PRJNA816047 77479 264 3.383886 8.93345904 Methanoplanus endosymbiosus 33865 Archaea Archaea 127 7.57e-34   NR WP_257741831.1 33865 g75644 i0 67.9 1.84090909090909 81 26 92 0 249 7 153 233 WP_257741831.1 N-acetylneuraminate synthase family protein [Methanoplanus endosymbiosus] diamond 486 127 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoplanus Methanoplanus endosymbiosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;