RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA816047" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA816047 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25740845 25740845 PRJNA816047d_S_NODE_51138_length_309_cov_14154.968750_g49303_i0 PRJNA816047 51138 309 14154.96875 43738.8534375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.8 2.93e-9   NR XP_004353386.1 1257118 g49303 i0 50 0.407766990291262 42 21 40.8 0 20 145 75 116 XP_004353386.1 uncharacterized protein ACA1_123770 [Acanthamoeba castellanii str. Neff] diamond 126 60.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32921652 32921652 PRJNA816047d_S_NODE_123617_length_238_cov_2.708108_g121782_i0 PRJNA816047 123617 238 2.708108 6.44529704 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 2.66e-9   NR XP_004337628.1 1257118 g121782 i0 67.4 0.579831932773109 46 12 54.2 1 220 92 21 66 XP_004337628.1 uncharacterized protein ACA1_164970 [Acanthamoeba castellanii str. Neff] diamond 138 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32938805 32938805 PRJNA816047d_S_NODE_112937_length_244_cov_1.303665_g111102_i0 PRJNA816047 112937 244 1.303665 3.1809426 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.9 4.32e-13   NR XP_004353541.1 1257118 g111102 i0 58.2 0.676229508196721 55 22 67.6 1 242 78 35 88 XP_004353541.1 uncharacterized protein ACA1_144040 [Acanthamoeba castellanii str. Neff] diamond 165 68.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32939353 32939353 PRJNA816047d_S_NODE_79121_length_263_cov_1.704762_g77286_i0 PRJNA816047 79121 263 1.7047620000000001 4.48352406 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87 8.34e-20   NR XP_004339793.1 1257118 g77286 i0 64.4 0.673003802281369 59 20 66.2 1 261 88 61 119 XP_004339793.1 nuclear transport factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 177 87 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32942244 32942244 PRJNA816047d_S_NODE_46337_length_322_cov_1.174721_g44502_i0 PRJNA816047 46337 322 1.174721 3.78260162 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.4 3.87e-5   NR XP_004339960.1 1257118 g44502 i0 32.5 1.3416149068323 77 50 69.9 1 295 71 569 645 XP_004339960.1 SAC3/GANP family protein, partial [Acanthamoeba castellanii str. Neff] diamond 432 52.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33007573 33007573 PRJNA816047d_S_NODE_64211_length_284_cov_1.229437_g62376_i0 PRJNA816047 64211 284 1.229437 3.49160108 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.6 4.16e-11   NR XP_004342218.1 1257118 g62376 i0 59.6 1.1830985915493 52 21 54.9 0 39 194 112 163 XP_004342218.1 cwf18 pre-mRNA splicing factor protein [Acanthamoeba castellanii str. Neff] diamond 336 66.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33024316 33024316 PRJNA816047d_S_NODE_120148_length_241_cov_1.180851_g118313_i0 PRJNA816047 120148 241 1.180851 2.84585091 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.5 1.91e-16   NR XP_004336066.1 1257118 g118313 i0 68.9 1.53112033195021 61 18 75.9 1 9 191 36 95 XP_004336066.1 NAD(P)H:quinone oxidoreductase, type IV, putative [Acanthamoeba castellanii str. Neff] diamond 369 80.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33058700 33058700 PRJNA816047d_S_NODE_60781_length_290_cov_1.147679_g58946_i0 PRJNA816047 60781 290 1.147679 3.3282691 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.1 5.41e-8   NR XP_004352749.1 1257118 g58946 i0 43.1 0.744827586206897 72 37 71.4 2 209 3 17 87 XP_004352749.1 SH3 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 216 60.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33109832 33109832 PRJNA816047d_S_NODE_44494_length_327_cov_1.959854_g42659_i0 PRJNA816047 44494 327 1.959854 6.40872258 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.2 1.61e-6   NR XP_004338809.1 1257118 g42659 i0 46.4 0.63302752293578 69 33 62.4 2 326 123 282 347 XP_004338809.1 CBS domain containing protein [Acanthamoeba castellanii str. Neff] diamond 207 56.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33146999 33146999 PRJNA816047d_S_NODE_44887_length_326_cov_1.483516_g43052_i0 PRJNA816047 44887 326 1.483516 4.83626216 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.3 3.15e-4   NR XP_004341801.1 1257118 g43052 i0 27 1.92331288343558 100 68 89.3 2 321 31 74 171 XP_004341801.1 uncharacterized protein ACA1_200060 [Acanthamoeba castellanii str. Neff] diamond 627 49.7 0.991951710261569 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;