RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA816047" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA816047 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33144096 33144096 PRJNA816047d_S_NODE_69991_length_274_cov_3.425339_g68156_i0 PRJNA816047 69991 274 3.425339 9.38542886 Acanthamoeba polyphaga mimivirus 212035 Viruses Viruses 62 8.65e-9   NR AEJ34442.1 212035 g68156 i0 45.3 0.700729927007299 64 35 70.1 0 3 194 517 580 AEJ34442.1 hypothetical protein MIMI_L205 [Acanthamoeba polyphaga mimivirus] diamond 192 62 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
33160829 33160829 PRJNA816047d_S_NODE_35624_length_359_cov_1.692810_g33789_i0 PRJNA816047 35624 359 1.69281 6.0771879 Tupanvirus deep ocean 2126984 Viruses Viruses 93.2 3.05e-20   NR YP_010780800.1 2126984 g33789 i0 55.7 0.66016713091922 79 32 66 2 4 240 193 268 YP_010780800.1 hypothetical protein QJ856_gp0565 [Tupanvirus deep ocean] diamond 237 93.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
33178241 33178241 PRJNA816047d_S_NODE_51488_length_309_cov_1.085938_g49653_i0 PRJNA816047 51488 309 1.085938 3.35554842 Orf virus 10258 Viruses Viruses 43.9 0.0246   NR ADY76865.1 10258 g49653 i0 55.6 0.349514563106796 36 16 35 0 158 51 162 197 ADY76865.1 PP219 [Orf virus] diamond 108 43.9 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;