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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA815356" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 21 ✖

bioproject 1

  • PRJNA815356 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
819157 819157 PRJNA815356_P_NODE_9301_length_250_cov_0.881356_g9138_i0 PRJNA815356 9301 250 0.881356 2.20339 Actinomycetes 1760 Bacteria Bacteria 120 2.89e-30   NR WP_375432178.1 335381 g9138 i0 87.9 1.584 66 8 79.2 0 198 1 33 98 WP_375432178.1 ABC transporter substrate-binding protein [uncultured Friedmanniella sp.] diamond 396 120 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Friedmanniella uncultured Friedmanniella sp.
12298379 12298379 PRJNA815356_P_NODE_9930_length_246_cov_0.901734_g9767_i0 PRJNA815356 9930 246 0.901734 2.21826564 Rhodoglobus sp. 1950123 Bacteria Bacteria 160 5.2999999999999994e-46   NR HWR86478.1 1950123 g9767 i0 92.5 0.975609756097561 80 6 97.6 0 3 242 192 271 HWR86478.1 aminotransferase class V-fold PLP-dependent enzyme [Rhodoglobus sp.] diamond 240 160 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoglobus Rhodoglobus sp.
17397427 17397427 PRJNA815356_P_NODE_10374_length_244_cov_0.912281_g10211_i0 PRJNA815356 10374 244 0.912281 2.22596564 Knoellia sp. Soil729 1736394 Bacteria Bacteria 150 1.45e-41   NR WP_056138954.1 1736394 g10211 i0 95.1 0.995901639344262 81 4 99.6 0 244 2 83 163 WP_056138954.1 THUMP-like domain-containing protein [Knoellia sp. Soil729] diamond 243 150 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Intrasporangiaceae Knoellia Knoellia sp. Soil729
21221128 21221128 PRJNA815356_P_NODE_10137_length_245_cov_0.906977_g9974_i0 PRJNA815356 10137 245 0.906977 2.22209365 Mycobacterium sp. 1785 Bacteria Bacteria 163 8.72e-48   NR WP_292981776.1 1785 g9974 i0 100 0.991836734693878 81 0 99.2 0 2 244 86 166 WP_292981776.1 SCO6745 family protein [Mycobacterium sp.] diamond 243 163 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
23771601 23771601 PRJNA815356_P_NODE_9359_length_250_cov_0.881356_g9196_i0 PRJNA815356 9359 250 0.881356 2.20339 Nocardioides humi 449461 Bacteria Bacteria 155 4.139999999999999e-43   NR WP_141003214.1 449461 g9196 i0 93.9 0.984 82 5 98.4 0 3 248 173 254 WP_141003214.1 aldehyde dehydrogenase family protein [Nocardioides humi] diamond 246 155 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Nocardioides Nocardioides humi
26873570 26873570 PRJNA815356_P_NODE_9921_length_246_cov_1.346821_g9758_i0 PRJNA815356 9921 246 1.346821 3.31317966 PVC group 1783257 Bacteria Bacteria 67.8 8.09e-13   NR WP_277495596.1 708131 g9758 i0 43.1 3.60975609756098 72 41 87.8 0 224 9 5 76 WP_277495596.1 acyl carrier protein [Aurantimicrobium minutum] diamond 888 68.2 0.994134897360704 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aurantimicrobium Aurantimicrobium minutum
26990925 26990925 PRJNA815356_P_NODE_9282_length_250_cov_0.881356_g9119_i0 PRJNA815356 9282 250 0.881356 2.20339 Mycobacterium sp. 1785 Bacteria Bacteria 85.9 1.43e-19   NR WP_292988655.1 1785 g9119 i0 100 0.54 45 0 54 0 136 2 1 45 WP_292988655.1 hypothetical protein [Mycobacterium sp.] diamond 135 85.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
27433924 27433924 PRJNA815356_P_NODE_10683_length_242_cov_0.923077_g10520_i0 PRJNA815356 10683 242 0.923077 2.23384634 Mycolicibacterium mageritense 53462 Bacteria Bacteria 130 7e-33   NR WP_036436713.1 53462 g10520 i0 73.4 0.979338842975207 79 21 97.9 0 4 240 686 764 WP_036436713.1 hypothetical protein [Mycolicibacterium mageritense] diamond 237 130 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium mageritense
28475669 28475669 PRJNA815356_P_NODE_9346_length_250_cov_0.881356_g9183_i0 PRJNA815356 9346 250 0.881356 2.20339 Mycobacterium sp. 1785 Bacteria Bacteria 155 6.199999999999999e-46   NR WP_292988849.1 1785 g9183 i0 100 0.984 82 0 98.4 0 248 3 16 97 WP_292988849.1 TetR/AcrR family transcriptional regulator [Mycobacterium sp.] diamond 246 155 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
28633724 28633724 PRJNA815356_P_NODE_7407_length_271_cov_1.575758_g7244_i0 PRJNA815356 7407 271 1.575758 4.27030418 Mycobacterium sp. 1785 Bacteria Bacteria 179 1.63e-53   NR WP_292981243.1 1785 g7244 i0 100 0.985239852398524 89 0 98.5 0 269 3 232 320 WP_292981243.1 hypothetical protein [Mycobacterium sp.] diamond 267 179 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
29485757 29485757 PRJNA815356_P_NODE_9790_length_247_cov_0.896552_g9627_i0 PRJNA815356 9790 247 0.896552 2.21448344 uncultured Amnibacterium sp. 1631851 Bacteria Bacteria 150 8.879999999999997e-42   NR WP_375405853.1 1631851 g9627 i0 93.9 0.995951417004049 82 5 99.6 0 246 1 128 209 WP_375405853.1 tyrosine-type recombinase/integrase [uncultured Amnibacterium sp.] diamond 246 150 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Amnibacterium uncultured Amnibacterium sp.
29801642 29801642 PRJNA815356_P_NODE_10131_length_245_cov_0.906977_g9968_i0 PRJNA815356 10131 245 0.906977 2.22209365 Mycobacterium sp. 1785 Bacteria Bacteria 60.8 1.53e-8   NR WP_292974838.1 1785 g9968 i0 100 0.355102040816327 29 0 35.5 0 228 142 410 438 WP_292974838.1 PPE family protein [Mycobacterium sp.] diamond 87 60.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
30212267 30212267 PRJNA815356_P_NODE_9012_length_252_cov_0.871508_g8849_i0 PRJNA815356 9012 252 0.871508 2.19620016 Nocardioides sp. 35761 Bacteria Bacteria 93.6 5.26e-20   NR WP_292676795.1 35761 g8849 i0 59.5 0.94047619047619 79 29 92.9 2 2 235 562 638 WP_292676795.1 right-handed parallel beta-helix repeat-containing protein [Nocardioides sp.] diamond 237 93.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Nocardioides Nocardioides sp.
30339282 30339282 PRJNA815356_P_NODE_10132_length_245_cov_0.906977_g9969_i0 PRJNA815356 10132 245 0.906977 2.22209365 Actinomycetospora atypica 1290095 Bacteria Bacteria 151 3.2e-43   NR WP_378038687.1 1290095 g9969 i0 100 0.991836734693878 81 0 99.2 0 1 243 129 209 WP_378038687.1 anti-sigma-D factor RsdA [Actinomycetospora atypica] diamond 243 151 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Actinomycetospora Actinomycetospora atypica
30812688 30812688 PRJNA815356_P_NODE_9174_length_251_cov_0.876404_g9011_i0 PRJNA815356 9174 251 0.876404 2.19977404 Pseudoclavibacter sp. 1915061 Bacteria Bacteria 147 2.2199999999999998e-42   NR HHW50447.1 1915061 g9011 i0 100 0.99203187250996006 83 0 99.2 0 2 250 81 163 HHW50447.1 hydantoinase B/oxoprolinase family protein [Pseudoclavibacter sp.] diamond 249 147 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Pseudoclavibacter Pseudoclavibacter sp.
30852975 30852975 PRJNA815356_P_NODE_9534_length_249_cov_0.886364_g9371_i0 PRJNA815356 9534 249 0.886364 2.20704636 Actinomycetes 1760 Bacteria Bacteria 70.1 9.12e-12   NR MCW2714814.1 1909291 g9371 i0 62 4.55421686746988 71 26 84.3 1 248 39 133 203 MCW2714814.1 hypothetical protein [Frankiales bacterium] diamond 1134 70.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Frankiales     Frankiales bacterium
31002403 31002403 PRJNA815356_P_NODE_10734_length_242_cov_0.923077_g10571_i0 PRJNA815356 10734 242 0.923077 2.23384634 Mycobacterium sp. 1785 Bacteria Bacteria 157 2.4499999999999998e-47   NR WP_293004563.1 1785 g10571 i0 98.8 0.991735537190083 80 1 99.2 0 242 3 4 83 WP_293004563.1 DUF2599 domain-containing protein [Mycobacterium sp.] diamond 240 157 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
31508333 31508333 PRJNA815356_P_NODE_9936_length_246_cov_0.901734_g9773_i0 PRJNA815356 9936 246 0.901734 2.21826564 Microbacterium sp. 51671 Bacteria Bacteria 67.8 5.87e-11   NR HEX5860161.1 51671 g9773 i0 94.1 0.414634146341463 34 2 41.5 0 246 145 509 542 HEX5860161.1 phosphatase PAP2 family protein [Microbacterium sp.] diamond 102 67.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Microbacterium Microbacterium sp.
31824301 31824301 PRJNA815356_P_NODE_9337_length_250_cov_0.881356_g9174_i0 PRJNA815356 9337 250 0.881356 2.20339 Mycobacterium sp. 1785 Bacteria Bacteria 84.3 3.43e-18   NR MDT5206821.1 1785 g9174 i0 82.7 1.236 52 9 62.4 0 1 156 122 173 MDT5206821.1 multiple sugar transport system ATP-binding protein [Mycobacterium sp.] diamond 309 84.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
32181318 32181318 PRJNA815356_P_NODE_10738_length_242_cov_0.923077_g10575_i0 PRJNA815356 10738 242 0.923077 2.23384634 Friedmanniella 53387 Bacteria Bacteria 141 2.83e-38   NR WP_294693294.1 335381 g10575 i0 85 3.96694214876033 80 12 99.2 0 2 241 299 378 WP_294693294.1 M16 family metallopeptidase [uncultured Friedmanniella sp.] diamond 960 141 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Friedmanniella uncultured Friedmanniella sp.
32267596 32267596 PRJNA815356_P_NODE_9418_length_249_cov_1.607955_g9255_i0 PRJNA815356 9418 249 1.607955 4.00380795 Mycobacterium sp. 1785 Bacteria Bacteria 78.6 5.54e-15   NR MCW2690558.1 1785 g9255 i0 58.4 0.927710843373494 77 29 90.4 2 242 18 80 155 MCW2690558.1 hypothetical protein [Mycobacterium sp.] diamond 231 78.6 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;