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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA814235" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 11 ✖

bioproject 1

  • PRJNA814235 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26990827 26990827 PRJNA814235_P_NODE_109962_length_203_cov_2.072289_g108567_i0 PRJNA814235 109962 203 2.072289 4.20674667 Deltaproteobacteria bacterium Smac51 2946587 Bacteria Bacteria 56.2 3.77e-7   NR UQZ91181.1 2946587 g108567 i0 88 0.369458128078818 25 3 36.9 0 128 202 416 440 UQZ91181.1 CoA-disulfide reductase [Deltaproteobacteria bacterium Smac51] diamond 75 56.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium Smac51
27220855 27220855 PRJNA814235_P_NODE_100902_length_203_cov_2.403614_g99507_i0 PRJNA814235 100902 203 2.403614 4.87933642 Myxococcota 2818505 Bacteria Bacteria 46.6 9.63e-4   NR OQB11796.1 1852869 g99507 i0 83.3 2.82266009852217 24 4 35.5 0 130 201 322 345 OQB11796.1 MAG: Outer membrane porin F precursor [Deltaproteobacteria bacterium ADurb.Bin207] diamond 573 46.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium ADurb.Bin207
27906932 27906932 PRJNA814235_P_NODE_112525_length_203_cov_2.006024_g111130_i0 PRJNA814235 112525 203 2.006024 4.07222872 Deltaproteobacteria bacterium RBG_16_71_12 1797848 Bacteria Bacteria 42 0.0423   NR OGQ24223.1 1797848 g111130 i0 76 0.369458128078818 25 6 36.9 0 203 129 793 817 OGQ24223.1 MAG: hypothetical protein A2138_08225 [Deltaproteobacteria bacterium RBG_16_71_12] diamond 75 42 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_16_71_12
28380842 28380842 PRJNA814235_P_NODE_196406_length_150_cov_5.008850_g195011_i0 PRJNA814235 196406 150 5.00885 7.513275 Microvenator marinus 2600177 Bacteria Bacteria 50.8 1.48e-5   NR WP_146961089.1 2600177 g195011 i0 74.1 0.54 27 7 54 0 67 147 193 219 WP_146961089.1 MXAN_2562 family outer membrane beta-barrel protein [Microvenator marinus] diamond 81 50.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
28421346 28421346 PRJNA814235_P_NODE_201106_length_150_cov_2.734513_g199711_i0 PRJNA814235 201106 150 2.734513 4.1017695 Myxococcota 2818505 Bacteria Bacteria 45.4 0.0012   NR PKN58301.1 2013741 g199711 i0 69.2 1.04 26 8 52 0 150 73 525 550 PKN58301.1 MAG: hypothetical protein CVU56_06570 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14] diamond 156 45.4 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14
28515922 28515922 PRJNA814235_P_NODE_117887_length_203_cov_1.843373_g116492_i0 PRJNA814235 117887 203 1.843373 3.74204719 Bacteria 2 Bacteria Bacteria 46.6 9.67e-4   NR OPL07327.1 1775671 g116492 i0 79.2 1.07881773399015 24 5 35.5 0 5 76 418 441 OPL07327.1 MAG: hypothetical protein AVO33_06050, partial [delta proteobacterium ML8_F1] diamond 219 46.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       delta proteobacterium ML8_F1
28799774 28799774 PRJNA814235_P_NODE_106287_length_203_cov_2.180723_g104892_i0 PRJNA814235 106287 203 2.180723 4.42686769 Chloroflexota 200795 Bacteria Bacteria 48.9 1.46e-4   NR OGP62842.1 1797826 g104892 i0 91.7 4.25615763546798 24 2 35.5 0 74 3 392 415 OGP62842.1 MAG: potassium-transporting ATPase subunit KdpA [Deltaproteobacteria bacterium RBG_13_47_9] diamond 864 48.9 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium RBG_13_47_9
29936816 29936816 PRJNA814235_P_NODE_96231_length_203_cov_2.668675_g94836_i0 PRJNA814235 96231 203 2.668675 5.41741025 Myxococcota 2818505 Bacteria Bacteria 48.5 1.97e-4   NR SBW09278.1 34034 g94836 i0 92 0.738916256157635 25 2 36.9 0 202 128 180 204 SBW09278.1 exported hypothetical protein [uncultured delta proteobacterium] diamond 150 48.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
31128301 31128301 PRJNA814235_P_NODE_197155_length_150_cov_4.132743_g195760_i0 PRJNA814235 197155 150 4.132743 6.1991145 Microvenator marinus 2600177 Bacteria Bacteria 50.8 1.41e-5   NR WP_249756198.1 2600177 g195760 i0 84 0.5 25 4 50 0 77 3 100 124 WP_249756198.1 pyridoxal phosphate-dependent aminotransferase [Microvenator marinus] diamond 75 50.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
32457433 32457433 PRJNA814235_P_NODE_90659_length_203_cov_3.283133_g89264_i0 PRJNA814235 90659 203 3.283133 6.66475999 Microvenator marinus 2600177 Bacteria Bacteria 52.4 8.69e-6   NR WP_146958609.1 2600177 g89264 i0 95.8 0.354679802955665 24 1 35.5 0 201 130 159 182 WP_146958609.1 serine/threonine protein kinase [Microvenator marinus] diamond 72 52.4 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
32615172 32615172 PRJNA814235_P_NODE_114920_length_203_cov_1.939759_g113525_i0 PRJNA814235 114920 203 1.939759 3.93771077 Deltaproteobacteria bacterium ADurb.Bin2 2026735 Bacteria Bacteria 46.2 0.0013   NR OQB15032.1 1852869 g113525 i0 80 0.369458128078818 25 5 36.9 0 2 76 31 55 OQB15032.1 MAG: Sodium/hydrogen exchanger family protein [Deltaproteobacteria bacterium ADurb.Bin207] diamond 75 46.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       Deltaproteobacteria bacterium ADurb.Bin207

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;