RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA813520" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA813520 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12294272 12294272 PRJNA813520_S_NODE_150_length_807_cov_46.645244_g127_i0 PRJNA813520 150 807 46.645244 376.42711908 root 1 Root_unresolved Root_unresolved 334 3.4499999999999987e-107   NR ODN03678.1 48709 g127 i0 68.2 166.617100371747 242 73 88.8 3 91 807 6 246 ODN03678.1 Heat shock 70 kDa protein [Orchesella cincta] diamond 134460 337 0.991097922848665 Eukaryota Opisthokonta Metazoa Arthropoda Collembola Entomobryomorpha Orchesellidae Orchesella Orchesella cincta
28010886 28010886 PRJNA813520_S_NODE_105_length_956_cov_18.204962_g85_i0 PRJNA813520 105 956 18.204962 174.03943672 Diptera 7147 Arthropoda Arthropoda 137 2.2e-35   NR XP_037894365.1 7396 g85 i0 48.6 9.87866108786611 140 66 43.9 1 188 607 49 182 XP_037894365.1 ADP-ribose glycohydrolase OARD1 isoform X1 [Glossina fuscipes] diamond 9444 138 0.992753623188406 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Glossinidae Glossina Glossina fuscipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;