RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA812715" and tax_phylum = "Hofneiviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Hofneiviricota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA812715 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27117334 27117334 PRJNA812715_P_NODE_75062_length_293_cov_1.127273_g73262_i0 PRJNA812715 75062 293 1.127273 3.30290989 Escherichia phage Copypasta 3096133 Viruses Viruses 59.3 1.93e-9   NR WPH57058.1 3096133 g73262 i0 66 0.511945392491468 50 17 51.2 0 224 75 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 59.3 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
27465269 27465269 PRJNA812715_P_NODE_120083_length_241_cov_2.827381_g118282_i0 PRJNA812715 120083 241 2.827381 6.81398821 Escherichia phage Copypasta 3096133 Viruses Viruses 42.7 0.00353   NR WPH57058.1 3096133 g118282 i0 48.2 0.697095435684647 56 29 69.7 0 5 172 1 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 168 42.7 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
28475517 28475517 PRJNA812715_P_NODE_120106_length_241_cov_2.666667_g118305_i0 PRJNA812715 120106 241 2.666667 6.42666747 Escherichia phage Copypasta 3096133 Viruses Viruses 58.2 3.02e-9   NR WPH57058.1 3096133 g118305 i0 62 0.622406639004149 50 19 62.2 0 219 70 1 50 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 150 58.2 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29107058 29107058 PRJNA812715_P_NODE_46548_length_401_cov_2.170732_g44751_i0 PRJNA812715 46548 401 2.170732 8.70463532 Escherichia phage Copypasta 3096133 Viruses Viruses 44.7 0.00272   NR WPH57058.1 3096133 g44751 i0 61.5 1.0997506234414 39 15 29.2 0 120 236 18 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 441 44.7 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
30244044 30244044 PRJNA812715_P_NODE_71392_length_302_cov_11.580786_g69592_i0 PRJNA812715 71392 302 11.580786 34.97397372 Escherichia phage Copypasta 3096133 Viruses Viruses 77.8 1.1e-16   NR WPH57058.1 3096133 g69592 i0 65.5 0.54635761589404 55 19 54.6 0 3 167 2 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 165 77.8 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
30622877 30622877 PRJNA812715_P_NODE_47593_length_395_cov_4.981366_g45796_i0 PRJNA812715 47593 395 4.981366 19.6763957 Escherichia phage Copypasta 3096133 Viruses Viruses 53.1 1.39e-6   NR WPH57058.1 3096133 g45796 i0 53.6 0.736708860759494 56 26 42.5 0 101 268 1 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 291 53.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31286492 31286492 PRJNA812715_P_NODE_60595_length_336_cov_3.558935_g58796_i0 PRJNA812715 60595 336 3.558935 11.9580216 Escherichia phage Copypasta 3096133 Viruses Viruses 48.1 7.11e-5   NR WPH57058.1 3096133 g58796 i0 71.4 0.3125 35 10 31.3 0 227 123 1 35 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 105 48.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
32045887 32045887 PRJNA812715_P_NODE_110618_length_246_cov_2.508671_g108817_i0 PRJNA812715 110618 246 2.508671 6.17133066 Escherichia phage Copypasta 3096133 Viruses Viruses 47.8 3.93e-5   NR WPH57058.1 3096133 g108817 i0 61.7 0.573170731707317 47 18 57.3 0 227 87 1 47 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 141 47.8 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
32077458 32077458 PRJNA812715_P_NODE_86118_length_274_cov_9.746269_g84317_i0 PRJNA812715 86118 274 9.746269 26.70477706 Escherichia phage Copypasta 3096133 Viruses Viruses 43.5 0.00243   NR WPH57058.1 3096133 g84317 i0 68.6 0.383211678832117 35 11 38.3 0 69 173 1 35 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 105 43.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;