RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA812001" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812001 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13563992 13563992 PRJNA812001_P_NODE_13911_length_431_cov_10.603352_g13665_i0 PRJNA812001 13911 431 10.603352 45.70044712 Eukaryota 2759 Fungi Fungi 196 5.570000000000001e-59   NR KAG0286410.1 64522 g13665 i0 67.1 11.5406032482599 140 45 96.8 1 2 418 226 365 KAG0286410.1 hypothetical protein BGZ96_009474 [Linnemannia gamsii] diamond 4974 197 0.99492385786802 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia gamsii
18662141 18662141 PRJNA812001_P_NODE_39195_length_311_cov_9.352941_g38949_i0 PRJNA812001 39195 311 9.352941 29.08764651 Mucoromycota 1913637 Fungi Fungi 161 6.4700000000000004e-49   NR KAI9303706.1 76405 g38949 i0 80.2 12.2508038585209 91 18 87.8 0 289 17 39 129 KAI9303706.1 40S ribosomal protein S22-A [Cunninghamella echinulata] diamond 3810 162 0.993827160493827 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Cunninghamella Cunninghamella echinulata
27212124 27212124 PRJNA812001_P_NODE_30382_length_334_cov_6.877395_g30136_i0 PRJNA812001 30382 334 6.877395 22.9704993 Rhizophagus clarus 94130 Fungi Fungi 77 1.09e-13   NR GES99488.1 94130 g30136 i0 43.2 5.00299401197605 81 46 72.8 0 25 267 2122 2202 GES99488.1 midasin [Rhizophagus clarus] diamond 1671 77 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus clarus
29043945 29043945 PRJNA812001_P_NODE_136168_length_234_cov_4.267081_g135922_i0 PRJNA812001 136168 234 4.267081 9.98496954 Lichtheimia ramosa 688394 Fungi Fungi 43.5 0.00975   NR CDS11410.1 688394 g135922 i0 69 0.371794871794872 29 9 37.2 0 223 137 128 156 CDS11410.1 hypothetical protein LRAMOSA03673 [Lichtheimia ramosa] diamond 87 43.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ramosa
29462696 29462696 PRJNA812001_P_NODE_31430_length_331_cov_12.496124_g31184_i0 PRJNA812001 31430 331 12.496124 41.36217044 Fungi 4751 Fungi Fungi 62 6.11e-10   NR XP_051455026.1 29922 g31184 i0 70 5.42900302114804 40 12 36.3 0 325 206 52 91 XP_051455026.1 uncharacterized protein EV154DRAFT_517201 [Mucor mucedo] diamond 1797 62.4 0.993589743589744 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
31697776 31697776 PRJNA812001_P_NODE_9237_length_514_cov_45.519274_g8991_i0 PRJNA812001 9237 514 45.519274 233.96906836 Blakeslea trispora 4850 Fungi Fungi 130 3.84e-35   NR KAI8373739.1 4850 g8991 i0 95.7 0.40272373540856 69 3 40.3 0 198 404 77 145 KAI8373739.1 hypothetical protein BD560DRAFT_394198 [Blakeslea trispora] diamond 207 130 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Blakeslea Blakeslea trispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;