RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA812001" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA812001 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28064985 28064985 PRJNA812001_P_NODE_98825_length_247_cov_1.172414_g98579_i0 PRJNA812001 98825 247 1.172414 2.89586258 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.7 0.029   NR MCL6448524.1 2033014 g98579 i0 28.6 0.935222672064777 77 55 93.5 0 11 241 53 129 MCL6448524.1 hypothetical protein [Armatimonadota bacterium] diamond 231 42.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28128275 28128275 PRJNA812001_P_NODE_2025_length_1053_cov_4.314286_g1839_i0 PRJNA812001 2025 1053 4.314286 45.42943158 Fimbriimonas sp. 1936159 Bacteria Bacteria 69.7 1.54e-9   NR MDR3689178.1 1936159 g1839 i0 64 0.142450142450142 50 15 13.4 1 1 141 210 259 MDR3689178.1 hypothetical protein [Fimbriimonas sp.] diamond 150 69.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;