RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA812001" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA812001 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31002241 31002241 PRJNA812001_P_NODE_12234_length_454_cov_8.918635_g11988_i0 PRJNA812001 12234 454 8.918635 40.4906029 Erythrocytic necrosis virus 1543320 Viruses Viruses 93.2 1.63e-21   NR QCF47491.1 1543320 g11988 i0 87.8 0.323788546255507 49 6 32.4 0 297 443 26 74 QCF47491.1 RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 147 93.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
31223121 31223121 PRJNA812001_P_NODE_122875_length_243_cov_0.905882_g122629_i0 PRJNA812001 122875 243 0.905882 2.20129326 Tupanvirus deep ocean 2126984 Viruses Viruses 79 6.61e-15   NR YP_010780739.1 2126984 g122629 i0 49.4 1 81 40 98.8 1 242 3 1041 1121 YP_010780739.1 hypothetical protein QJ856_gp0626 [Tupanvirus deep ocean] diamond 243 79 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus altamarinense
32488941 32488941 PRJNA812001_P_NODE_19959_length_379_cov_7.124183_g19713_i0 PRJNA812001 19959 379 7.124183 27.00065357 Erythrocytic necrosis virus 1543320 Viruses Viruses 60.5 1.16e-8   NR QCF47477.1 1543320 g19713 i0 60.9 0.728232189973615 46 17 35.6 1 68 202 91 136 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 276 60.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;