RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA812001" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA812001 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29327874 29327874 PRJNA812001_P_NODE_19949_length_379_cov_12.392157_g19703_i0 PRJNA812001 19949 379 12.392157 46.96627503 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 52 8.23e-6   NR MDC0946509.1 2358456 g19703 i0 57.1 1.17150395778364 42 18 33.2 0 2 127 39 80 MDC0946509.1 SMR family transporter [Nitrospinaceae bacterium] diamond 444 52 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
30844261 30844261 PRJNA812001_P_NODE_106814_length_246_cov_0.890173_g106568_i0 PRJNA812001 106814 246 0.890173 2.18982558 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 74.3 5.79e-15   NR HEY5871040.1 2528274 g106568 i0 89.5 0.890243902439024 38 4 46.3 0 245 132 78 115 HEY5871040.1 rhodanese-like domain-containing protein [Candidatus Tectimicrobiota bacterium] diamond 219 74.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;