RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA811725" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA811725 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27370666 27370666 PRJNA811725_P_NODE_29523_length_286_cov_1.746479_g29277_i0 PRJNA811725 29523 286 1.746479 4.99492994 Caudoviricetes sp. 2832643 Viruses Viruses 99.4 6.53e-23   NR XOR47533.1 2832643 g29277 i0 49.5 0.975524475524476 93 47 97.6 0 1 279 91 183 XOR47533.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 279 99.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28222667 28222667 PRJNA811725_P_NODE_30806_length_281_cov_1.341346_g30560_i0 PRJNA811725 30806 281 1.341346 3.76918226 Bacillus phage vB_BspM_AgentSmith 2836110 Viruses Viruses 82 8.61e-16   NR QXN70554.1 2836110 g30560 i0 49.4 0.907473309608541 85 40 89.7 3 2 253 412 494 QXN70554.1 putative DnaB helicase [Bacillus phage vB_BspM_AgentSmith] diamond 255 82 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Bacillus phage vB_BspM_AgentSmith
32393850 32393850 PRJNA811725_P_NODE_15359_length_384_cov_24.196141_g15114_i0 PRJNA811725 15359 384 24.196141 92.91318144 Microvirus sp. 2202559 Viruses Viruses 192 3.7699999999999995e-56   NR WNK12977.1 2202559 g15114 i0 72.1 1.90625 122 33 95.3 1 2 367 58 178 WNK12977.1 MAG: major capsid protein [Microvirus sp.] diamond 732 192 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;