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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA811725" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811725 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6327994 6327994 PRJNA811725_P_NODE_26285_length_299_cov_3.508850_g26039_i0 PRJNA811725 26285 299 3.50885 10.4914615 Muribaculaceae bacterium 2498093 Bacteria Bacteria 70.1 3.03e-12   NR MDE5552317.1 2498093 g26039 i0 71.1 4.54515050167224 45 13 45.2 0 283 149 46 90 MDE5552317.1 orotidine-5'-phosphate decarboxylase [Muribaculaceae bacterium] diamond 1359 70.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae   Muribaculaceae bacterium
7602055 7602055 PRJNA811725_P_NODE_26726_length_298_cov_1.831111_g26480_i0 PRJNA811725 26726 298 1.831111 5.45671078 Pseudarcicella hirudinis 1079859 Bacteria Bacteria 209 2.51e-63   NR WP_092014237.1 1079859 g26480 i0 99 0.996644295302013 99 1 99.7 0 2 298 236 334 WP_092014237.1 cysteine--tRNA ligase [Pseudarcicella hirudinis] diamond 297 209 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Pseudarcicella Pseudarcicella hirudinis
14838158 14838158 PRJNA811725_P_NODE_27772_length_293_cov_3.159091_g27526_i0 PRJNA811725 27772 293 3.159091 9.25613663 Pedobacter flavus 3113906 Bacteria Bacteria 100 1.16e-23   NR WP_330145760.1 3113906 g27526 i0 100 0.501706484641638 49 0 50.2 0 145 291 44 92 WP_330145760.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Pedobacter flavus] diamond 147 100 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter flavus
15252233 15252233 PRJNA811725_P_NODE_41052_length_242_cov_1.710059_g40806_i0 PRJNA811725 41052 242 1.710059 4.13834278 Algoriphagus sp. PAP.12 2996678 Bacteria Bacteria 146 1.01e-39   NR WP_268035156.1 2996678 g40806 i0 93.8 2.97520661157025 80 5 99.2 0 2 241 125 204 WP_268035156.1 dihydrolipoyl dehydrogenase [Algoriphagus sp. PAP.12] diamond 720 146 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae Algoriphagus Algoriphagus sp. PAP.12
16112440 16112440 PRJNA811725_P_NODE_31153_length_279_cov_3.106796_g30907_i0 PRJNA811725 31153 279 3.106796 8.66796084 Prevotella sp. oral taxon 317 652721 Bacteria Bacteria 189 1.35e-56   NR WP_009229440.1 652721 g30907 i0 92.5 2 93 7 100 0 279 1 271 363 WP_009229440.1 carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317] diamond 558 189 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp. oral taxon 317
17388357 17388357 PRJNA811725_P_NODE_31794_length_276_cov_1.517241_g31548_i0 PRJNA811725 31794 276 1.517241 4.18758516 Pedobacter flavus 3113906 Bacteria Bacteria 148 4.09e-42   NR WP_330146777.1 3113906 g31548 i0 98.7 0.826086956521739 76 1 82.6 0 276 49 199 274 WP_330146777.1 orotidine-5'-phosphate decarboxylase [Pedobacter flavus] diamond 228 148 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter flavus
22486800 22486800 PRJNA811725_P_NODE_24318_length_310_cov_2.856540_g24072_i0 PRJNA811725 24318 310 2.85654 8.855274 Saprospiraceae bacterium 2202734 Bacteria Bacteria 92.4 2.92e-19   NR HLO54912.1 2202734 g24072 i0 91.8 0.474193548387097 49 4 47.4 0 162 308 154 202 HLO54912.1 DUF2723 domain-containing protein [Saprospiraceae bacterium] diamond 147 92.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
26737314 26737314 PRJNA811725_P_NODE_26181_length_299_cov_4.628319_g25935_i0 PRJNA811725 26181 299 4.628319 13.83867381 Flavobacterium sp. 28YEA47A 3156276 Bacteria Bacteria 88.2 8.930000000000001e-21   NR WP_370033781.1 3156276 g25935 i0 74 0.501672240802676 50 13 50.2 0 151 2 7 56 WP_370033781.1 hypothetical protein [Flavobacterium sp. 28YEA47A] diamond 150 88.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. 28YEA47A
26896271 26896271 PRJNA811725_P_NODE_18521_length_352_cov_5.150538_g18275_i0 PRJNA811725 18521 352 5.150538 18.12989376 Epilithonimonas tenax 191577 Bacteria Bacteria 170 3.34e-50   NR WP_028122494.1 191577 g18275 i0 84.9 0.792613636363636 93 14 79.3 0 351 73 175 267 WP_028122494.1 hypothetical protein [Epilithonimonas tenax] diamond 279 170 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Epilithonimonas Epilithonimonas tenax
27054347 27054347 PRJNA811725_P_NODE_28702_length_289_cov_2.291667_g28456_i0 PRJNA811725 28702 289 2.291667 6.62291763 Flavisolibacter ginsenosidimutans 661481 Bacteria Bacteria 140 1.55e-39   NR WP_146781499.1 661481 g28456 i0 77.8 2.04498269896194 99 19 99.7 1 2 289 1 99 WP_146781499.1 MotA/TolQ/ExbB proton channel family protein [Flavisolibacter ginsenosidimutans] diamond 591 140 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavisolibacter Flavisolibacter ginsenosidimutans
27307293 27307293 PRJNA811725_P_NODE_24103_length_310_cov_3.337553_g23857_i0 PRJNA811725 24103 310 3.337553 10.3464143 Marivirga lumbricoides 1046115 Bacteria Bacteria 94 2.53e-20   NR PTB95562.1 1046115 g23857 i0 81.8 0.532258064516129 55 10 53.2 0 146 310 84 138 PTB95562.1 hypothetical protein C9994_11130 [Marivirga lumbricoides] diamond 165 94 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Marivirgaceae Marivirga Marivirga lumbricoides
27338865 27338865 PRJNA811725_P_NODE_30463_length_282_cov_1.990431_g30217_i0 PRJNA811725 30463 282 1.990431 5.61301542 Chryseobacterium sp. LC2 1871047 Bacteria Bacteria 103 1.11e-24   NR WP_230636367.1 2897331 g30217 i0 57.4 1 94 37 100 1 1 282 157 247 WP_230636367.1 hypothetical protein, partial [Chryseobacterium sp. LC2016-29] diamond 282 103 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp. LC2016-29
27465238 27465238 PRJNA811725_P_NODE_31763_length_276_cov_2.182266_g31517_i0 PRJNA811725 31763 276 2.182266 6.02305416 Bacteroidota bacterium 1898104 Bacteria Bacteria 195 3.64e-56   NR RKV89908.1 1898104 g31517 i0 98.9 1 92 1 100 0 276 1 391 482 RKV89908.1 MAG: TonB-dependent receptor [Bacteroidota bacterium] diamond 276 195 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27496744 27496744 PRJNA811725_P_NODE_17203_length_365_cov_4.133562_g16957_i0 PRJNA811725 17203 365 4.133562 15.0875013 Flavobacteriales bacterium 2021391 Bacteria Bacteria 68.6 9.54e-12   NR MCZ2084835.1 2021391 g16957 i0 44.3 0.649315068493151 79 44 64.9 0 45 281 1 79 MCZ2084835.1 hypothetical protein [Flavobacteriales bacterium] diamond 237 68.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium
28191055 28191055 PRJNA811725_P_NODE_30766_length_281_cov_1.480769_g30520_i0 PRJNA811725 30766 281 1.480769 4.16096089 Dysgonamonadaceae bacterium 2065189 Bacteria Bacteria 186 1.48e-52   NR MBP7180387.1 2065189 g30520 i0 95.7 0.99288256227758 93 4 99.3 0 279 1 744 836 MBP7180387.1 TonB-dependent receptor [Dysgonamonadaceae bacterium] diamond 279 186 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Dysgonomonadaceae   Dysgonamonadaceae bacterium
28263050 28263050 PRJNA811725_P_NODE_31606_length_277_cov_1.509804_g31360_i0 PRJNA811725 31606 277 1.509804 4.18215708 Kaistella 2782231 Bacteria Bacteria 120 9.07e-31   NR WP_373707498.1 2782235 g31360 i0 77 2.3826714801444 74 17 80.1 0 224 3 1 74 WP_373707498.1 glycosyltransferase family 2 protein [Kaistella sp.] diamond 660 120 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Kaistella Kaistella sp.
28380703 28380703 PRJNA811725_P_NODE_32926_length_270_cov_2.137056_g32680_i0 PRJNA811725 32926 270 2.137056 5.7700512 Riemerella sp. 2382126 Bacteria Bacteria 176 5.029999999999999e-54   NR RKW62916.1 2382126 g32680 i0 98.9 1 90 1 100 0 270 1 116 205 RKW62916.1 MAG: outer membrane lipoprotein carrier protein LolA [Riemerella sp.] diamond 270 176 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Riemerella Riemerella sp.
28570106 28570106 PRJNA811725_P_NODE_28947_length_288_cov_2.525581_g28701_i0 PRJNA811725 28947 288 2.525581 7.27367328 Pedobacter flavus 3113906 Bacteria Bacteria 161 5.259999999999999e-48   NR WP_330144993.1 3113906 g28701 i0 84.8 1.09375 105 0 92.7 1 287 21 92 196 WP_330144993.1 non-canonical purine NTP diphosphatase [Pedobacter flavus] diamond 315 161 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter flavus
28633525 28633525 PRJNA811725_P_NODE_27107_length_296_cov_5.295964_g26861_i0 PRJNA811725 27107 296 5.295964 15.67605344 Chryseobacterium rhizosphaerae 395937 Bacteria Bacteria 69.7 3.58e-13   NR WP_309882770.1 395937 g26861 i0 47.4 0.790540540540541 78 41 79.1 0 294 61 11 88 WP_309882770.1 hypothetical protein [Chryseobacterium rhizosphaerae] diamond 234 69.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium rhizosphaerae
28799760 28799760 PRJNA811725_P_NODE_35247_length_255_cov_2.247253_g35001_i0 PRJNA811725 35247 255 2.247253 5.73049515 Prevotella 838 Bacteria Bacteria 147 8.759999999999999e-40   NR MFC2493528.1 59823 g35001 i0 77.1 2.56470588235294 109 0 98.8 1 253 2 94 202 MFC2493528.1 DUF349 domain-containing protein [Prevotella sp.] diamond 654 147 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp.
29453868 29453868 PRJNA811725_P_NODE_9610_length_478_cov_2.901235_g9366_i0 PRJNA811725 9610 478 2.901235 13.8679033 Bacteroidales bacterium 2030927 Bacteria Bacteria 123 6.15e-32   NR MEG1523369.1 2030927 g9366 i0 47.6 0.778242677824268 124 62 75.9 1 393 31 9 132 MEG1523369.1 hypothetical protein [Bacteroidales bacterium] diamond 372 123 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
29485555 29485555 PRJNA811725_P_NODE_24350_length_310_cov_2.793249_g24104_i0 PRJNA811725 24350 310 2.793249 8.6590719 Pedobacter flavus 3113906 Bacteria Bacteria 103 2.3599999999999997e-25   NR WP_330146736.1 3113906 g24104 i0 100 0.454838709677419 47 0 45.5 0 1 141 134 180 WP_330146736.1 haloacid dehalogenase [Pedobacter flavus] diamond 141 103 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter flavus
30022858 30022858 PRJNA811725_P_NODE_39531_length_245_cov_0.895349_g39285_i0 PRJNA811725 39531 245 0.895349 2.19360505 uncultured Cytophagales bacterium 158755 Bacteria Bacteria 136 4.97e-35   NR CAA9328946.1 158755 g39285 i0 79 0.991836734693878 81 17 99.2 0 243 1 615 695 CAA9328946.1 MAG: Acidobacterial duplicated orphan permease (function unknown) [uncultured Cytophagales bacterium] diamond 243 136 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     uncultured Cytophagales bacterium
30085758 30085758 PRJNA811725_P_NODE_28452_length_290_cov_1.755760_g28206_i0 PRJNA811725 28452 290 1.75576 5.091704 Alloprevotella tannerae 76122 Bacteria Bacteria 205 7.91e-60   NR WP_303763762.1 76122 g28206 i0 100 1.98620689655172 96 0 99.3 0 288 1 638 733 WP_303763762.1 TonB-dependent receptor [Alloprevotella tannerae] diamond 576 205 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella tannerae
30686039 30686039 PRJNA811725_P_NODE_31393_length_278_cov_1.834146_g31147_i0 PRJNA811725 31393 278 1.834146 5.09892588 Fluviicola sp. 1917219 Bacteria Bacteria 127 1.4e-31   NR WP_343633648.1 1917219 g31147 i0 66.7 0.971223021582734 90 30 97.1 0 278 9 26 115 WP_343633648.1 T9SS type A sorting domain-containing protein [Fluviicola sp.] diamond 270 127 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Crocinitomicaceae Fluviicola Fluviicola sp.
31539754 31539754 PRJNA811725_P_NODE_28396_length_290_cov_2.686636_g28150_i0 PRJNA811725 28396 290 2.686636 7.7912444 Riemerella sp. 2382126 Bacteria Bacteria 189 2.6099999999999996e-56   NR MBF1097074.1 2382126 g28150 i0 100 0.993103448275862 96 0 99.3 0 289 2 332 427 MBF1097074.1 2-oxo acid dehydrogenase subunit E2 [Riemerella sp.] diamond 288 189 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Riemerella Riemerella sp.
31634405 31634405 PRJNA811725_P_NODE_24496_length_310_cov_2.518987_g24250_i0 PRJNA811725 24496 310 2.518987 7.8088597 Flavisolibacter sp. 1954249 Bacteria Bacteria 110 5.710000000000001e-29   NR HUC81121.1 1954249 g24250 i0 89.1 1.59677419354839 55 6 53.2 0 1 165 15 69 HUC81121.1 fatty acid desaturase [Flavisolibacter sp.] diamond 495 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavisolibacter Flavisolibacter sp.
31919215 31919215 PRJNA811725_P_NODE_26197_length_299_cov_4.168142_g25951_i0 PRJNA811725 26197 299 4.168142 12.46274458 Pedobacter flavus 3113906 Bacteria Bacteria 121 7.22e-30   NR WP_330146215.1 3113906 g25951 i0 78 0.822742474916388 82 4 68.2 1 3 206 412 493 WP_330146215.1 tetratricopeptide repeat protein [Pedobacter flavus] diamond 246 121 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter flavus
32086208 32086208 PRJNA811725_P_NODE_26698_length_298_cov_2.773333_g26452_i0 PRJNA811725 26698 298 2.773333 8.26453234 Flavobacterium 237 Bacteria Bacteria 97.4 2.6e-21   NR MBP8158112.1 239 g26452 i0 92 2.04362416107383 50 4 50.3 0 298 149 20 69 MBP8158112.1 circularly permuted type 2 ATP-grasp protein [Flavobacterium sp.] diamond 609 97.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;